iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099554

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

U-box domain-containing family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTR_0002s16150g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s16150	POPTR_0002s16150.1	POPTR_0002s16150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.90e-26	91.7	766	835

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           +p++f+CpI  e+MrdP+v+++G+ty++++++ wl+sg+ t+P+t+ +l+++dl+Pn +lr+ iq+w+++
   Q: 766  PPSYFICPIFQEVMRDPHVAADGYTYEAEALKGWLDSGHDTSPMTNLKLAHRDLIPNRALRSAIQEWLQQ 835
           79******************************************************************98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAVVSRACCD NATSESIDVC GIRVAGNMES GREIVEEPVA RVIEDKIFVA VGKSVKECKL 60
MLLWALQNSG GKRICIIHVL QPSQMIPLMG TKFRASALKE QEVRAYREVE RQAMHKMLDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAATATCAG GTTAAATTTT AGAGAAATCT GGAACTACAG TGATAGACGA AGTTACTGAA 60
ACTGTTGGGA GACAAAGTTT TGAAGAGACC GAAACAAGAG ATTAGACTTT AGAGTTTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR017441--Protein_kinase_ATP_BS
IPR014729--Rossmann-like_a/b/a_fold
IPR008271--Ser/Thr_kinase_AS
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00107--PROTEIN_KINASE_ATP
PS50011--PROTEIN_KINASE_DOM
PS00108--PROTEIN_KINASE_ST
PS51698--U_BOX

Pfam

PF00069--Pkinase
PF04564--U-box

SMART

SM00220--S_TKc
SM00504--Ubox

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0002s16150g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000187	Aegilops tauschii	46.63	4.00e-172	597.00
IUUC-Aml-001187	Ailuropoda melanoleuca	29.17	1.00e-24	108.00
IUUC-Atr-002778	Amborella trichopoda	45.29	0.00e+00	645.00
IUUC-Apl-003389	Anas platyrhynchos	31.28	7.00e-19	89.40
IUUC-Aca-004237	Anolis carolinensis	32.42	6.00e-23	101.00
IUUC-Aly-005712	Arabidopsis lyrata	59.58	0.00e+00	891.00
IUUC-Ath-007146	Arabidopsis thaliana	58.14	0.00e+00	895.00
IUUC-Ame-010954	Astyanax mexicanus	31.51	5.00e-23	102.00
IUUC-Bdi-014983	Brachypodium distachyon	44.65	0.00e+00	661.00
IUUC-Bol-016049	Brassica oleracea	58.02	0.00e+00	820.00
IUUC-Bra-017486	Brassica rapa	57.83	0.00e+00	867.00
IUUC-Cel-018594	Caenorhabditis elegans	31.71	2.00e-22	100.00
IUUC-Cja-019696	Callithrix jacchus	29.51	2.00e-24	107.00
IUUC-Cfa-020060	Canis familiaris	32.42	1.00e-23	103.00
IUUC-Cpo-021993	Cavia porcellus	28.80	9.00e-25	108.00
IUUC-Cho-024714	Choloepus hoffmanni	30.17	3.00e-18	87.00
IUUC-Cin-025605	Ciona intestinalis	31.09	4.00e-24	105.00
IUUC-Csv-026198	Ciona savignyi	31.67	2.00e-21	96.30
IUUC-Dno-029651	Dasypus novemcinctus	32.42	9.00e-24	104.00
IUUC-Dor-030202	Dipodomys ordii	31.05	4.00e-23	102.00
IUUC-Dme-032105	Drosophila melanogaster	29.07	4.00e-22	99.40
IUUC-Ete-033170	Echinops telfairi	31.36	4.00e-22	98.60
IUUC-Eca-033970	Equus caballus	32.42	1.00e-23	104.00
IUUC-Fca-036250	Felis catus	29.17	7.00e-25	108.00
IUUC-Fal-036785	Ficedula albicollis	32.42	2.00e-23	103.00
IUUC-Gmo-039264	Gadus morhua	31.65	1.00e-24	107.00
IUUC-Gga-040899	Gallus gallus	32.42	3.00e-23	102.00
IUUC-Gac-042332	Gasterosteus aculeatus	32.47	1.00e-24	107.00
IUUC-Gma-043336	Glycine max	62.40	0.00e+00	1040.00
IUUC-Ggo-045471	Gorilla gorilla	29.51	3.00e-24	106.00
IUUC-Hsa-046936	Homo sapiens	29.17	4.00e-24	106.00
IUUC-Hvu-047310	Hordeum vulgare	45.20	0.00e+00	688.00
IUUC-Itr-049014	Ictidomys tridecemlineatus	32.42	1.00e-23	104.00
IUUC-Lpe-051291	Leersia perrieri	44.24	0.00e+00	653.00
IUUC-Loc-052286	Lepisosteus oculatus	31.22	2.00e-22	100.00
IUUC-Laf-053977	Loxodonta africana	32.42	1.00e-23	104.00
IUUC-Mtr-058733	Medicago truncatula	62.79	0.00e+00	1046.00
IUUC-Mga-059277	Meleagris gallopavo	31.28	7.00e-19	89.40
IUUC-Mmr-061168	Microcebus murinus	32.42	1.00e-23	103.00
IUUC-Mmu-064082	Mus musculus	29.51	6.00e-25	109.00
IUUC-Mac-064649	Musa acuminata	48.27	0.00e+00	695.00
IUUC-Mpu-065934	Mustela putorius furo	29.17	7.00e-25	108.00
IUUC-Mlu-068139	Myotis lucifugus	31.96	5.00e-23	102.00
IUUC-Nle-070178	Nomascus leucogenys	32.42	1.00e-23	103.00
IUUC-Opr-070705	Ochotona princeps	30.35	2.00e-20	93.20
IUUC-Ont-072127	Oreochromis niloticus	32.42	3.00e-24	105.00
IUUC-Oan-073526	Ornithorhynchus anatinus	31.28	7.00e-19	89.40
IUUC-Ocu-074350	Oryctolagus cuniculus	29.35	5.00e-25	109.00
IUUC-Oba-074988	Oryza barthii	45.63	0.00e+00	644.00
IUUC-Obr-076707	Oryza brachyantha	45.16	0.00e+00	650.00
IUUC-Ogl-077374	Oryza glaberrima	44.84	0.00e+00	656.00
IUUC-Ogu-078239	Oryza glumaepatula	51.01	2.00e-152	532.00
IUUC-Oin-080032	Oryza indica	44.57	0.00e+00	653.00
IUUC-Olo-080937	Oryza longistaminata	45.96	0.00e+00	648.00
IUUC-Ome-081468	Oryza meridionalis	43.01	0.00e+00	669.00
IUUC-Oni-082442	Oryza nivara	44.69	0.00e+00	655.00
IUUC-Opu-083566	Oryza punctata	48.57	1.00e-156	546.00
IUUC-Oru-084266	Oryza rufipogon	44.69	0.00e+00	656.00
IUUC-Osa-086151	Oryza sativa	44.69	0.00e+00	656.00
IUUC-Ola-086953	Oryzias latipes	31.40	8.00e-25	107.00
IUUC-Oga-088351	Otolemur garnettii	29.17	3.00e-24	107.00
IUUC-Oar-090279	Ovis aries	31.96	6.00e-23	101.00
IUUC-Ptr-091607	Pan troglodytes	29.17	4.00e-24	106.00
IUUC-Pan-092403	Papio anubis	29.17	3.00e-24	106.00
IUUC-Psi-093071	Pelodiscus sinensis	32.42	2.00e-23	103.00
IUUC-Pma-094100	Petromyzon marinus	30.15	3.00e-23	102.00
IUUC-Pfo-096035	Poecilia formosa	34.33	3.00e-24	105.00
IUUC-Pab-098396	Pongo abelii	29.51	5.00e-24	106.00
IUUC-Ppe-101646	Prunus persica	68.16	0.00e+00	1126.00
IUUC-Pva-103086	Pteropus vampyrus	30.90	5.00e-24	106.00
IUUC-Rno-105688	Rattus norvegicus	29.17	2.00e-24	107.00
IUUC-Sit-110219	Setaria italica	45.99	0.00e+00	654.00
IUUC-Sly-111528	Solanum lycopersicum	66.79	0.00e+00	712.00
IUUC-Stu-112831	Solanum tuberosum	57.13	0.00e+00	893.00
IUUC-Sar-113364	Sorex araneus	28.77	5.00e-19	88.60
IUUC-Sbi-114291	Sorghum bicolor	46.73	0.00e+00	674.00
IUUC-Ssc-115332	Sus scrofa	29.17	2.00e-24	107.00
IUUC-Tgu-117301	Taeniopygia guttata	31.28	5.00e-19	90.10
IUUC-Tru-117594	Takifugu rubripes	31.51	8.00e-24	104.00
IUUC-Tni-120577	Tetraodon nigroviridis	29.29	2.00e-24	107.00
IUUC-Tca-121389	Theobroma cacao	78.36	0.00e+00	780.00
IUUC-Tae-125058	Triticum aestivum	45.83	0.00e+00	653.00
IUUC-Tbe-127643	Tupaia belangeri	29.17	6.00e-25	108.00
IUUC-Vvi-131057	Vitis vinifera	64.11	0.00e+00	1088.00
IUUC-Xtr-132291	Xenopus tropicalis	31.40	1.00e-23	103.00
IUUC-Xma-133793	Xiphophorus maculatus	34.09	7.00e-25	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence