iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113977

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G293400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g028660	Sb01g028660.1	Sb01g028660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	32.5	168	210

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++ f  +d++++lp C H+fh  C+  w       +++ +CPlCr
   Q: 168  CAVCQSAFrdDDELRLLPaCRHAFHSRCVDPW------LRGNPSCPLCR 210
           ******9988777*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASTAIPSPP PPAVPERRLP PLVPRLADDG GGGGRGDDAR GSSAGGGGSG SVAGISPSIL 60
IIAVIVVVML LASLCIHYFI RHLCRHVGPA GSSSASSSRQ APPLPLVSRP AAGTASVAPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCACACTT ATAAGCCACG GCCCACGGAC AAGCCCGCAA CAGCGCGACG CCCGGCCTCC 60
TCCTTCACCC GCGCCACCAC ACCAGCAGGA GGCAGGCAGG ACCCTGGAGC CTTGGAGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g028660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014033	Brachypodium distachyon	62.45	8.00e-35	140.00
IUUC-Hvu-047223	Hordeum vulgare	64.53	5.00e-54	203.00
IUUC-Lpe-051311	Leersia perrieri	59.70	3.00e-31	128.00
IUUC-Ogl-077917	Oryza glaberrima	56.59	5.00e-48	184.00
IUUC-Ogu-078288	Oryza glumaepatula	56.59	5.00e-48	183.00
IUUC-Ome-081134	Oryza meridionalis	68.16	1.00e-53	202.00
IUUC-Oni-082980	Oryza nivara	62.76	2.00e-57	214.00
IUUC-Opu-084047	Oryza punctata	58.68	3.00e-46	178.00
IUUC-Oru-084483	Oryza rufipogon	55.81	4.00e-42	164.00
IUUC-Osa-085593	Oryza sativa	59.58	5.00e-51	194.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence