iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006787

Ensembl Protein ID

AT3G56230.1

UniProt Accession

Q9LYL9; Y3623_ARATH

Genbank Protein ID

CAB87422.1; AEE79499.1; AAS77485.1; BAD44062.1

Protein Name

BTB/POZ domain-containing protein At3g56230

Genbank Nucleotide ID

AL163763; CP002686; BT012360; AK176299

Gene Name

At3g56230; F18O21_190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G56230	AT3G56230.1	AT3G56230.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	1.80e-09	38.7	111	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvg..geeffahkivLaasSsvFyalflmeleesksklmveikdvqpevfrallkFlYtgkld 66
           aD++l+ g  g  ++ah++ La+ S+ F++ ++++  ++ ++  ++++++  e ++all+FlYtg+l 
   Q: 111  ADILLKPGddGPPIPAHRALLASKSEIFKNILDSDGCKTAPEYAITLQELNSEQLQALLEFLYTGTLA 178
           689999999999********************88888777799999999****************996 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Protein Sequence
(Fasta)

MDCSICTTMP SILRPPRNTI CGSCYEGART TIALLKKLEG SKEDRHDKSN HNSTINNGSS 60
ISSSPLFSCE PQPLEKVIKW MKNMKETEEE QKKRIVFLSS FVSGFKEQLH ADILLKPGDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTATTTG TTAAATTATG CTCAACAACT CTTTACGGAA ACAATCATGT ACCGAGTTGA 60
TTATTAACGA AAAATATATT TAAAAATGTT TCAAGAACGT AGCCATCTCT AACCAATTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ

PROSITE

PS50097--BTB

Pfam

PF00651--BTB

SMART

SM00225--BTB

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

ath:AT3G56230

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000429	Aegilops tauschii	38.60	2.00e-47	181.00
IUUC-Atr-002736	Amborella trichopoda	36.79	5.00e-54	203.00
IUUC-Aly-005631	Arabidopsis lyrata	94.89	1.00e-134	471.00
IUUC-Ang-009831	Aspergillus niger	29.03	1.20e-01	31.20
IUUC-Bdi-014297	Brachypodium distachyon	37.76	4.00e-47	181.00
IUUC-Bol-016412	Brassica oleracea	89.05	1.00e-131	461.00
IUUC-Bra-016828	Brassica rapa	89.05	2.00e-130	457.00
IUUC-Csa-023336	Chlorocebus sabaeus	28.08	2.00e-09	55.80
IUUC-Fso-038335	Fusarium solani	33.33	1.00e-04	39.70
IUUC-Gma-042752	Glycine max	48.54	8.00e-69	252.00
IUUC-Hvu-047385	Hordeum vulgare	37.37	9.00e-49	186.00
IUUC-Lpe-051721	Leersia perrieri	40.58	6.00e-56	209.00
IUUC-Mcc-055226	Macaca mulatta	29.45	8.00e-11	60.50
IUUC-Mtr-058636	Medicago truncatula	45.45	3.00e-62	231.00
IUUC-Mac-065146	Musa acuminata	43.21	4.00e-58	217.00
IUUC-Oba-075862	Oryza barthii	37.81	1.00e-51	196.00
IUUC-Obr-076688	Oryza brachyantha	41.16	6.00e-42	163.00
IUUC-Ogl-077091	Oryza glaberrima	40.14	2.00e-53	201.00
IUUC-Ogu-078708	Oryza glumaepatula	39.27	8.00e-54	202.00
IUUC-Oin-079680	Oryza indica	39.79	3.00e-53	201.00
IUUC-Olo-080839	Oryza longistaminata	38.91	7.00e-51	192.00
IUUC-Ome-081298	Oryza meridionalis	39.01	2.00e-54	204.00
IUUC-Oni-082253	Oryza nivara	39.64	6.00e-55	206.00
IUUC-Opu-083665	Oryza punctata	39.57	1.00e-55	209.00
IUUC-Oru-084240	Oryza rufipogon	39.49	1.00e-49	188.00
IUUC-Osa-086261	Oryza sativa	39.27	7.00e-54	202.00
IUUC-Ppa-095493	Physcomitrella patens	34.43	2.00e-46	178.00
IUUC-Pop-099867	Populus trichocarpa	54.64	1.00e-84	305.00
IUUC-Ppe-102004	Prunus persica	53.17	8.00e-77	279.00
IUUC-Sha-107053	Sarcophilus harrisii	26.85	9.00e-13	66.20
IUUC-Smo-109560	Selaginella moellendorffii	33.92	2.00e-43	168.00
IUUC-Sly-111114	Solanum lycopersicum	51.94	9.00e-75	272.00
IUUC-Stu-112468	Solanum tuberosum	54.05	7.00e-57	212.00
IUUC-Sbi-113772	Sorghum bicolor	36.63	7.00e-46	176.00
IUUC-Tca-121564	Theobroma cacao	58.57	5.00e-88	316.00
IUUC-Tae-122878	Triticum aestivum	39.10	7.00e-54	203.00
IUUC-Vvi-131237	Vitis vinifera	53.21	5.00e-78	283.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence