iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121553

Ensembl Protein ID

EOY33591

UniProt Accession

A0A061GVR8; A0A061GVR8_THECC

Genbank Protein ID

EOY33591.1

Protein Name

Chromodomain-helicase-DNA-binding protein Mi-2, putative isoform 2

Genbank Nucleotide ID

CM001887

Gene Name

TCM_041528

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_041528	EOY33590	EOY33590
TCM_041528	EOY33591	EOY33591

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.40e-11	43.2	1385	1434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC +C+++++++ + + Ce Cr+w+H++ ++l+ e+  ++   + C kCr+
   Q: 1385 VCELCEQPYNSDLMYIHCETCRKWYHAEAVELE-ESRISDLVGFKCCKCRR 1434
           8*********999********************.99****999******86 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEPKVPRPRG RPRKRRRPEE ENESVAGDSK SNNSKTKKRA LVTRSMALVG RYVFKEFGEN 60
VFLGKIVSYD TGLYRVDYED GDFEDLESGE LRELILEESY FDDDLSRRKV RLDELVLSRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAATTCCA AGTTTCACAC TCCAACTCGG ACGAGTTCAA ATCGCTGTCT GACAAACCGA 60
CTACTGAGTC AGTACCACTT TCTCACGCGA GATAAAAGAG GCCGTTGTTC ACTCCTATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000221	Aegilops tauschii	36.34	0.00e+00	857.00
IUUC-Atr-002497	Amborella trichopoda	37.18	8.00e-136	478.00
IUUC-Aly-006239	Arabidopsis lyrata	52.14	0.00e+00	921.00
IUUC-Ath-007124	Arabidopsis thaliana	52.00	0.00e+00	955.00
IUUC-Acl-008313	Aspergillus clavatus	47.92	6.00e-10	59.30
IUUC-Afl-008508	Aspergillus flavus	47.27	1.00e-09	58.20
IUUC-Afu-008819	Aspergillus fumigatus	46.15	2.00e-10	60.50
IUUC-Ani-009451	Aspergillus nidulans	43.28	1.00e-10	60.80
IUUC-Aor-010143	Aspergillus oryzae	47.27	1.00e-09	57.80
IUUC-Ate-010574	Aspergillus terreus	47.92	3.00e-09	57.00
IUUC-Bdi-014067	Brachypodium distachyon	38.46	0.00e+00	712.00
IUUC-Bol-016146	Brassica oleracea	48.60	0.00e+00	905.00
IUUC-Bra-017694	Brassica rapa	51.06	0.00e+00	921.00
IUUC-Fox-038014	Fusarium oxysporum	42.86	2.00e-09	58.20
IUUC-Fso-038262	Fusarium solani	31.76	1.00e-10	61.60
IUUC-Gma-043962	Glycine max	49.38	0.00e+00	1433.00
IUUC-Hvu-047397	Hordeum vulgare	36.37	0.00e+00	845.00
IUUC-Lpe-051272	Leersia perrieri	36.46	4.00e-58	220.00
IUUC-Mtr-058339	Medicago truncatula	46.21	0.00e+00	632.00
IUUC-Mac-065252	Musa acuminata	38.88	0.00e+00	998.00
IUUC-Nfi-068496	Neosartorya fischeri	46.15	2.00e-10	60.50
IUUC-Oba-075125	Oryza barthii	36.83	0.00e+00	882.00
IUUC-Obr-076575	Oryza brachyantha	36.12	0.00e+00	851.00
IUUC-Ogl-077936	Oryza glaberrima	36.99	0.00e+00	881.00
IUUC-Ogu-078676	Oryza glumaepatula	36.68	0.00e+00	877.00
IUUC-Oin-079426	Oryza indica	27.86	1.00e-120	427.00
IUUC-Olo-080881	Oryza longistaminata	27.66	4.00e-122	432.00
IUUC-Ome-081742	Oryza meridionalis	28.97	6.00e-111	395.00
IUUC-Oni-082756	Oryza nivara	27.78	4.00e-121	429.00
IUUC-Opu-083405	Oryza punctata	36.45	0.00e+00	870.00
IUUC-Oru-084745	Oryza rufipogon	36.71	0.00e+00	877.00
IUUC-Pop-099219	Populus trichocarpa	55.00	0.00e+00	1719.00
IUUC-Ppe-101582	Prunus persica	41.60	1.00e-76	281.00
IUUC-Smo-109246	Selaginella moellendorffii	28.70	2.00e-67	250.00
IUUC-Sit-109749	Setaria italica	33.55	0.00e+00	758.00
IUUC-Sly-111813	Solanum lycopersicum	44.79	0.00e+00	717.00
IUUC-Sbi-114633	Sorghum bicolor	35.75	0.00e+00	847.00
IUUC-Tae-125025	Triticum aestivum	35.99	0.00e+00	858.00
IUUC-Tur-126797	Triticum urartu	40.67	3.00e-167	582.00
IUUC-Vvi-131129	Vitis vinifera	41.69	2.00e-75	278.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence