iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050277

Ensembl Protein ID

ENSLACP00000006983.1

UniProt Accession

H3ABG2; H3ABG2_LATCH

Genbank Protein ID

ENSLACP00000006983

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01115468

Gene Name

RNF25

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000006200.1	ENSLACT00000007042.1	ENSLACP00000006983.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-06	27.8	132	197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdg.plvlpCgHvfhadClqkw.........pglknssskefr...............CPlCr 46
           C iCl  f    +    ++C H fh +Cl ++         +++k  +    +               CP+Cr
   Q: 132  CVICLHGFqqN-EaFTKTSCYHYFHSHCLARYiqhmeeeieMQKK--E----MdqnrmptaeqelkviCPVCR 197
           ******99752.2244699**********9997777777663333..2....1333355777777777****8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

ALSLWAGLGG NGWELAHGAE LQCELIHLPL FLCPCRSQPW EVSITLYPAT AEDQTAQYVR 60
FTLCLALPPQ YPDAVPQITV RNPRGLSDEN IQSIQQCLMR IAESGVGAPI LYELIEKGKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCTGAGCT TGTGGGCCGG TTTGGGAGGG AATGGGTGGG AACTTGCTCA TGGAGCTGAA 60
CTGCAGTGTG AATTAATACA CCTCCCCCTT TTTCTCTGTC CCTGCAGGTC TCAGCCCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50908--RWD
PS50089--ZF_RING_2

Pfam

PF05773--RWD

SMART

SM00184--RING
SM00591--RWD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001954	Ailuropoda melanoleuca	43.75	9.00e-71	260.00
IUUC-Atr-002830	Amborella trichopoda	29.71	2.00e-13	69.70
IUUC-Apl-003293	Anas platyrhynchos	65.93	2.00e-76	279.00
IUUC-Aca-005092	Anolis carolinensis	62.66	1.00e-77	283.00
IUUC-Aly-005434	Arabidopsis lyrata	24.00	4.00e-13	68.60
IUUC-Ath-006770	Arabidopsis thaliana	26.67	4.00e-11	62.40
IUUC-Ame-011754	Astyanax mexicanus	50.00	5.00e-52	198.00
IUUC-Bta-012592	Bos taurus	43.12	3.00e-80	292.00
IUUC-Bdi-015061	Brachypodium distachyon	29.77	1.00e-11	64.30
IUUC-Bol-015743	Brassica oleracea	30.00	6.00e-12	64.70
IUUC-Bra-018072	Brassica rapa	25.54	1.00e-09	57.40
IUUC-Cel-018515	Caenorhabditis elegans	28.68	2.00e-08	52.80
IUUC-Cja-018930	Callithrix jacchus	44.26	7.00e-83	300.00
IUUC-Cfa-020156	Canis familiaris	42.26	2.00e-77	282.00
IUUC-Cpo-021290	Cavia porcellus	44.35	4.00e-80	291.00
IUUC-Csa-023214	Chlorocebus sabaeus	43.52	1.00e-82	300.00
IUUC-Cin-025416	Ciona intestinalis	35.04	5.00e-38	151.00
IUUC-Csv-026360	Ciona savignyi	35.82	3.00e-33	135.00
IUUC-Dre-028670	Danio rerio	51.54	4.00e-47	182.00
IUUC-Dno-029970	Dasypus novemcinctus	43.17	3.00e-80	292.00
IUUC-Dor-030152	Dipodomys ordii	40.83	7.00e-65	241.00
IUUC-Dme-031914	Drosophila melanogaster	34.72	3.00e-31	129.00
IUUC-Ete-033105	Echinops telfairi	63.44	9.00e-75	273.00
IUUC-Eca-033800	Equus caballus	60.17	2.00e-74	273.00
IUUC-Eeu-034525	Erinaceus europaeus	44.36	1.00e-40	160.00
IUUC-Fca-035644	Felis catus	44.89	1.00e-85	310.00
IUUC-Fal-037121	Ficedula albicollis	66.37	4.00e-76	278.00
IUUC-Gmo-039444	Gadus morhua	52.59	2.00e-56	213.00
IUUC-Gga-041221	Gallus gallus	63.25	5.00e-55	208.00
IUUC-Gac-042354	Gasterosteus aculeatus	55.31	5.00e-67	248.00
IUUC-Gma-043721	Glycine max	26.97	1.00e-12	67.80
IUUC-Ggo-044879	Gorilla gorilla	43.06	2.00e-81	296.00
IUUC-Hsa-045739	Homo sapiens	43.40	2.00e-81	295.00
IUUC-Itr-047915	Ictidomys tridecemlineatus	62.01	2.00e-71	263.00
IUUC-Lpe-051139	Leersia perrieri	28.98	3.00e-14	72.40
IUUC-Loc-052367	Lepisosteus oculatus	62.96	4.00e-16	75.50
IUUC-Laf-053559	Loxodonta africana	41.79	1.00e-83	303.00
IUUC-Mcc-055367	Macaca mulatta	65.29	1.00e-65	243.00
IUUC-Meu-056730	Macropus eugenii	44.84	2.00e-67	249.00
IUUC-Mtr-058418	Medicago truncatula	25.93	3.00e-12	65.90
IUUC-Mga-060090	Meleagris gallopavo	63.69	5.00e-48	184.00
IUUC-Mmr-060618	Microcebus murinus	44.52	4.00e-84	305.00
IUUC-Mdo-063084	Monodelphis domestica	45.82	5.00e-71	261.00
IUUC-Mmu-063854	Mus musculus	42.43	2.00e-76	279.00
IUUC-Mac-064922	Musa acuminata	30.86	3.00e-15	75.90
IUUC-Mpu-066419	Mustela putorius furo	43.74	4.00e-80	291.00
IUUC-Mlu-067289	Myotis lucifugus	44.40	4.00e-77	281.00
IUUC-Nle-069090	Nomascus leucogenys	43.87	3.00e-84	305.00
IUUC-Opr-070601	Ochotona princeps	45.29	2.00e-79	289.00
IUUC-Ont-072434	Oreochromis niloticus	53.06	1.00e-65	243.00
IUUC-Ocu-074855	Oryctolagus cuniculus	44.79	1.00e-80	293.00
IUUC-Oba-075792	Oryza barthii	29.89	1.00e-12	67.00
IUUC-Obr-076917	Oryza brachyantha	24.22	3.00e-13	69.30
IUUC-Ogl-077872	Oryza glaberrima	27.86	3.00e-11	62.40
IUUC-Ogu-078151	Oryza glumaepatula	28.72	1.00e-12	67.80
IUUC-Oin-079465	Oryza indica	28.72	6.00e-13	68.20
IUUC-Olo-080907	Oryza longistaminata	29.45	2.00e-08	54.30
IUUC-Ome-081752	Oryza meridionalis	26.32	5.00e-13	68.90
IUUC-Oni-082420	Oryza nivara	28.72	8.00e-13	67.80
IUUC-Opu-083810	Oryza punctata	25.79	1.00e-12	67.00
IUUC-Oru-085177	Oryza rufipogon	30.43	1.00e-12	67.00
IUUC-Ola-087231	Oryzias latipes	55.28	3.00e-50	191.00
IUUC-Oga-088963	Otolemur garnettii	42.12	1.00e-83	303.00
IUUC-Oar-089292	Ovis aries	42.95	2.00e-82	299.00
IUUC-Ptr-091214	Pan troglodytes	43.40	4.00e-81	295.00
IUUC-Pan-092823	Papio anubis	44.60	2.00e-86	312.00
IUUC-Psi-094084	Pelodiscus sinensis	59.63	6.00e-30	125.00
IUUC-Pfo-096406	Poecilia formosa	53.98	8.00e-64	237.00
IUUC-Pab-098212	Pongo abelii	43.40	1.00e-80	293.00
IUUC-Pop-099369	Populus trichocarpa	25.70	2.00e-11	62.80
IUUC-Pca-100897	Procavia capensis	38.43	7.00e-67	247.00
IUUC-Ppe-101702	Prunus persica	22.04	5.00e-08	52.00
IUUC-Pva-102899	Pteropus vampyrus	43.74	6.00e-80	291.00
IUUC-Rno-105369	Rattus norvegicus	42.40	1.00e-75	276.00
IUUC-Sha-107344	Sarcophilus harrisii	45.54	6.00e-69	254.00
IUUC-Smo-109636	Selaginella moellendorffii	26.56	2.00e-08	51.60
IUUC-Sit-109795	Setaria italica	28.82	6.00e-16	78.20
IUUC-Sly-111014	Solanum lycopersicum	22.98	1.00e-10	62.00
IUUC-Stu-112139	Solanum tuberosum	24.14	3.00e-12	65.90
IUUC-Sar-113487	Sorex araneus	62.96	3.00e-24	106.00
IUUC-Sbi-114714	Sorghum bicolor	26.34	4.00e-14	72.00
IUUC-Ssc-115465	Sus scrofa	44.00	5.00e-80	291.00
IUUC-Tgu-117113	Taeniopygia guttata	66.96	3.00e-84	305.00
IUUC-Tsy-119186	Tarsius syrichta	55.74	7.00e-14	71.60
IUUC-Tni-120219	Tetraodon nigroviridis	57.50	1.00e-34	138.00
IUUC-Tca-121748	Theobroma cacao	25.10	3.00e-06	46.20
IUUC-Tae-123014	Triticum aestivum	24.70	2.00e-13	70.10
IUUC-Tbe-127584	Tupaia belangeri	42.38	1.00e-42	167.00
IUUC-Ttr-128244	Tursiops truncatus	44.02	3.00e-79	288.00
IUUC-Vpa-130354	Vicugna pacos	43.09	2.00e-79	289.00
IUUC-Xtr-132402	Xenopus tropicalis	53.07	2.00e-64	239.00
IUUC-Xma-133442	Xiphophorus maculatus	53.54	6.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence