iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099358

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_175434; POPTR_0001s30420g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s30420	POPTR_0001s30420.1	POPTR_0001s30420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-06	28.7	234	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   d+++ lpC H fh  Cl  w       ++   CP+Cr
   Q: 234  CSICLESFseGDELIRLPCDHRFHSACLDPW------VRTCGDCPYCR 275
           ********66444888***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTSASELFYQ RRSRVSRADS DLGLEPSLSD RSFYQNYNRR HHHNHNHNHR HDLDGCDPLR 60
RPPHVRTPCH RLSSPSERAS ARLDQDTDQF VPSNNLTAET LSRPRVTGNG RLPGAVLLAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAGCAACG GTCCCTTCTT CCATCCCTTT CACTCACTAT CAAATATTAA TTCTGCATTT 60
CTACGAACCC TTCCCATCTC TTCATAATCC CTCTCCTATT TTAAACTCCC GTTTCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s30420g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000649	Aegilops tauschii	34.92	8.00e-19	86.70
IUUC-Atr-003023	Amborella trichopoda	41.87	9.00e-32	129.00
IUUC-Aly-006173	Arabidopsis lyrata	47.33	2.00e-33	135.00
IUUC-Ath-007567	Arabidopsis thaliana	57.45	1.00e-13	69.30
IUUC-Bdi-014868	Brachypodium distachyon	34.52	3.00e-30	124.00
IUUC-Bol-015528	Brassica oleracea	44.29	6.00e-34	136.00
IUUC-Bra-017272	Brassica rapa	43.73	8.00e-32	129.00
IUUC-Hvu-047572	Hordeum vulgare	41.53	9.00e-30	122.00
IUUC-Lpe-050997	Leersia perrieri	33.49	8.00e-20	90.10
IUUC-Mtr-058054	Medicago truncatula	39.08	5.00e-30	124.00
IUUC-Mac-064949	Musa acuminata	45.51	4.00e-27	114.00
IUUC-Oba-075741	Oryza barthii	42.78	9.00e-29	119.00
IUUC-Obr-076821	Oryza brachyantha	40.19	3.00e-29	120.00
IUUC-Ogl-077510	Oryza glaberrima	38.46	2.00e-29	122.00
IUUC-Ogu-078106	Oryza glumaepatula	33.02	3.00e-18	85.50
IUUC-Oin-080050	Oryza indica	38.01	4.00e-29	121.00
IUUC-Olo-080497	Oryza longistaminata	40.45	3.00e-24	104.00
IUUC-Ome-081477	Oryza meridionalis	38.46	1.00e-29	122.00
IUUC-Oni-083119	Oryza nivara	38.01	4.00e-29	120.00
IUUC-Opu-083882	Oryza punctata	35.52	7.00e-21	94.00
IUUC-Oru-085121	Oryza rufipogon	33.33	1.00e-18	86.30
IUUC-Osa-086007	Oryza sativa	38.46	1.00e-29	122.00
IUUC-Ppa-095736	Physcomitrella patens	37.35	3.00e-14	72.00
IUUC-Ppe-101691	Prunus persica	47.04	3.00e-41	161.00
IUUC-Sit-110752	Setaria italica	38.81	1.00e-27	115.00
IUUC-Sbi-114507	Sorghum bicolor	39.27	4.00e-31	127.00
IUUC-Tca-121654	Theobroma cacao	61.35	9.00e-58	216.00
IUUC-Tae-124401	Triticum aestivum	35.11	7.00e-29	120.00
IUUC-Vvi-131679	Vitis vinifera	52.23	2.00e-55	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence