iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042778

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000852

Gene Name

GLYMA_19G010200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA19G01310	GLYMA19G01310.1	GLYMA19G01310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.00e-14	53.4	1251	1297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC+vCg   +d+ s++ C+ C+  +H  Cl+++     p+ + w+Cp+C 
   Q: 1251 VCKVCGIDRDDD-SVLLCDTCDAEYHTYCLNPP-LARIPEGN-WYCPSCV 1297
           8******99987.7*******************.*******6.******6 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MIMELSDSTG ADRNPNAPPP HSNQNQDARS GLGIDLNEIP SPSSSFPETL PDSVAVDVVR 60
AYHDNPAPPP GGPAALPRGG SSPCAACAKP SPAAVNHHQL VVCDGCERDF HLSCAGIRGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGAAGTGA AGAAAAAATA AAAAAGGGGA ATAGAAACTG AGAAAAAGAG GTTAGCGAGT 60
TTACCTGCGA TTCAGATTAC GGTCCCATCC CTGTCTTTCC CTTTTCTTTT TCTCACATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR016177--DNA-bd_dom
IPR003888--FYrich_N
IPR001739--Methyl_CpG_DNA-bd
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50014--BROMODOMAIN_2
PS51542--FYRN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF01429--MBD
PF00628--PHD
PF15612--WHIM1

SMART

SM00249--PHD

Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010216--P:maintenance of DNA methylation
GO:0016567--P:protein ubiquitination
GO:0090308--P:regulation of methylation-dependent chromatin silencing

KEGG

gmx:100791814

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022637	Chlamydomonas reinhardtii	54.00	1.00e-08	50.80
IUUC-Cne-026801	Cryptococcus neoformans	53.19	6.00e-14	73.20
IUUC-Oba-075854	Oryza barthii	41.65	0.00e+00	1256.00
IUUC-Ogl-077886	Oryza glaberrima	39.22	2.00e-179	623.00
IUUC-Ogu-078887	Oryza glumaepatula	41.65	0.00e+00	1254.00
IUUC-Olo-080668	Oryza longistaminata	41.76	0.00e+00	1254.00
IUUC-Ome-081800	Oryza meridionalis	41.54	0.00e+00	1253.00
IUUC-Oni-082593	Oryza nivara	41.65	0.00e+00	1254.00
IUUC-Oru-084298	Oryza rufipogon	41.51	0.00e+00	1253.00
IUUC-Osa-085487	Oryza sativa	37.70	3.00e-162	565.00
IUUC-Ppa-095893	Physcomitrella patens	33.94	1.00e-113	405.00
IUUC-Ppe-101198	Prunus persica	56.81	0.00e+00	1942.00
IUUC-Sit-110633	Setaria italica	39.50	0.00e+00	1113.00
IUUC-Tgu-116964	Taeniopygia guttata	53.06	4.00e-13	71.20
IUUC-Tca-121595	Theobroma cacao	52.79	0.00e+00	2053.00
IUUC-Vvi-130929	Vitis vinifera	54.19	0.00e+00	1600.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence