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Tag Content
iUUCD ID IUUC-Xtr-132013
Ensembl Protein ID ENSXETP00000035212.3
UniProt Accession F6VHD9; F6VHD9_XENTR
Genbank Protein ID ENSXETP00000035212
Protein Name Splicing factor 3a subunit 1
Genbank Nucleotide ID AAMC01032032
Gene Name sf3a1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000016144.3 ENSXETT00000035212.3 ENSXETP00000035212.3
ENSXETG00000016144.3 ENSXETT00000066244.1 ENSXETP00000058658.1
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UDP/UBQ/UBQ_Other 9.00e-15 54.5 695 775
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UDP/UBQ/UBQ_Other
   S: 4    tvksldgs.eltlk.......vnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           +v++++++ e++l        ++  d+V+++K ki++++g+p+ +q+L+y+G+ ++d ++La+y++++g tihl +k++gg
   Q: 695  QVPNMQDKtEWKLGgqmlsftLPLPDQVSVIKVKIHEATGMPAGKQKLQYDGIFIKDSNSLAYYNMTNGATIHLALKERGG 775
           55555555555554444333357778**************************************************99875 PP
   
Organism Xenopus tropicalis
Protein Sequence
(Fasta)
MPAGPVQIMA PQTPDGGQCE QPLRQQMEEE KKEEVVPSKP VVGIIYPPPE VRNIVDKTAS 60
FVARNGPEFE ARIRQNEINN PKFNFLNPND PYHAYYRHKV NEFKEGKAQE PSAAIPKVMQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Xtr-132013|ULD,UBQ_Other|Xenopus tropicalis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TACCGCTTCT GTCCTTGTTT GTGGGATTGG AGTGGGCACC ATGCCGGCCG GACCAGTGCA 60
GATAATGGCG CCGCAGACAC CGGACGGAGG CCAGGTACGG GACTCTGCAT CGCGGCAGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Xtr-132013|ULD,UBQ_Other|Xenopus tropicalis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2
Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin
SMART

SM00648--SWAP
SM00213--UBQ
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000319 Aegilops tauschii 34.20 9.00e-49 187.00
IUUC-Aml-002416 Ailuropoda melanoleuca 86.86 0.00e+00 1037.00
IUUC-Atr-003001 Amborella trichopoda 39.60 2.00e-81 297.00
IUUC-Apl-003584 Anas platyrhynchos 83.60 0.00e+00 914.00
IUUC-Aca-004690 Anolis carolinensis 81.30 0.00e+00 1020.00
IUUC-Aly-005487 Arabidopsis lyrata 41.48 1.00e-55 211.00
IUUC-Ath-007275 Arabidopsis thaliana 41.52 2.00e-57 216.00
IUUC-Acl-008320 Aspergillus clavatus 40.70 8.00e-49 187.00
IUUC-Afl-008707 Aspergillus flavus 44.21 5.00e-58 218.00
IUUC-Afu-008786 Aspergillus fumigatus 38.60 2.00e-47 183.00
IUUC-Ani-009307 Aspergillus nidulans 41.40 1.00e-53 203.00
IUUC-Ang-009761 Aspergillus niger 43.86 6.00e-57 214.00
IUUC-Aor-010067 Aspergillus oryzae 44.21 4.00e-58 218.00
IUUC-Ate-010515 Aspergillus terreus 42.96 7.00e-58 218.00
IUUC-Ame-011842 Astyanax mexicanus 77.82 0.00e+00 974.00
IUUC-Bgr-012204 Blumeria graminis 33.66 6.00e-66 244.00
IUUC-Bta-013525 Bos taurus 86.86 0.00e+00 1036.00
IUUC-Bci-013842 Botrytis cinerea 42.09 6.00e-49 188.00
IUUC-Bdi-014436 Brachypodium distachyon 34.24 3.00e-73 269.00
IUUC-Bol-015186 Brassica oleracea 35.83 4.00e-67 249.00
IUUC-Bra-017856 Brassica rapa 34.34 2.00e-55 210.00
IUUC-Cel-018261 Caenorhabditis elegans 48.55 3.00e-77 282.00
IUUC-Cja-018989 Callithrix jacchus 86.73 0.00e+00 1023.00
IUUC-Cfa-020629 Canis familiaris 86.86 0.00e+00 1037.00
IUUC-Cpo-021759 Cavia porcellus 86.86 0.00e+00 1023.00
IUUC-Cre-022603 Chlamydomonas reinhardtii 65.08 4.00e-21 95.50
IUUC-Csa-023750 Chlorocebus sabaeus 86.60 0.00e+00 1022.00
IUUC-Cho-024581 Choloepus hoffmanni 81.40 1.00e-110 394.00
IUUC-Cin-025640 Ciona intestinalis 55.83 9.00e-145 507.00
IUUC-Csv-025855 Ciona savignyi 65.12 4.00e-102 365.00
IUUC-Cgl-026573 Colletotrichum gloeosporioides 38.93 1.00e-44 174.00
IUUC-Cne-026952 Cryptococcus neoformans 40.29 2.00e-48 187.00
IUUC-Dre-028055 Danio rerio 76.21 0.00e+00 953.00
IUUC-Dno-029259 Dasypus novemcinctus 86.37 0.00e+00 1042.00
IUUC-Dor-031081 Dipodomys ordii 86.47 0.00e+00 1022.00
IUUC-Dse-031438 Dothistroma septosporum 38.10 8.00e-48 185.00
IUUC-Dme-031975 Drosophila melanogaster 60.34 3.00e-151 528.00
IUUC-Ete-033177 Echinops telfairi 86.68 0.00e+00 838.00
IUUC-Eca-033670 Equus caballus 86.86 0.00e+00 1036.00
IUUC-Eeu-035100 Erinaceus europaeus 81.55 0.00e+00 653.00
IUUC-Fca-036176 Felis catus 86.86 0.00e+00 1037.00
IUUC-Fal-036776 Ficedula albicollis 82.60 0.00e+00 899.00
IUUC-Fox-037706 Fusarium oxysporum 37.98 3.00e-48 186.00
IUUC-Fso-038313 Fusarium solani 38.91 1.00e-44 174.00
IUUC-Gmo-038887 Gadus morhua 75.47 0.00e+00 983.00
IUUC-Ggr-039932 Gaeumannomyces graminis 36.40 5.00e-35 142.00
IUUC-Gga-041184 Gallus gallus 82.36 0.00e+00 891.00
IUUC-Gac-042118 Gasterosteus aculeatus 77.67 0.00e+00 978.00
IUUC-Gma-043480 Glycine max 43.73 1.00e-62 234.00
IUUC-Ggo-045641 Gorilla gorilla 84.36 0.00e+00 1018.00
IUUC-Hsa-045751 Homo sapiens 86.60 0.00e+00 1022.00
IUUC-Hvu-047702 Hordeum vulgare 30.49 6.00e-31 128.00
IUUC-Itr-047960 Ictidomys tridecemlineatus 86.86 0.00e+00 1036.00
IUUC-Kpa-049400 Komagataella pastoris 28.78 2.00e-28 120.00
IUUC-Lch-050152 Latimeria chalumnae 83.73 0.00e+00 701.00
IUUC-Lpe-051570 Leersia perrieri 43.37 7.00e-33 135.00
IUUC-Loc-051753 Lepisosteus oculatus 79.08 0.00e+00 1009.00
IUUC-Lma-053219 Leptosphaeria maculans 34.90 3.00e-34 139.00
IUUC-Laf-053643 Loxodonta africana 85.68 0.00e+00 1003.00
IUUC-Mcc-055091 Macaca mulatta 86.47 0.00e+00 1022.00
IUUC-Meu-056036 Macropus eugenii 77.17 0.00e+00 736.00
IUUC-Mor-057214 Magnaporthe oryzae 34.60 1.00e-34 140.00
IUUC-Mpo-057385 Magnaporthe poae 30.67 6.00e-13 67.80
IUUC-Mtr-057954 Medicago truncatula 37.84 4.00e-80 292.00
IUUC-Mla-059020 Melampsora laricipopulina 34.75 5.00e-47 182.00
IUUC-Mga-060176 Meleagris gallopavo 83.84 0.00e+00 922.00
IUUC-Mvi-060278 Microbotryum violaceum 34.02 5.00e-72 265.00
IUUC-Mmr-061602 Microcebus murinus 86.73 0.00e+00 1046.00
IUUC-Mdo-062047 Monodelphis domestica 86.71 0.00e+00 988.00
IUUC-Mmu-063377 Mus musculus 85.15 0.00e+00 1021.00
IUUC-Mac-065644 Musa acuminata 38.71 2.00e-17 84.70
IUUC-Mpu-066047 Mustela putorius furo 86.99 0.00e+00 1037.00
IUUC-Mlu-067039 Myotis lucifugus 86.73 0.00e+00 1006.00
IUUC-Nfi-068434 Neosartorya fischeri 42.96 5.00e-54 205.00
IUUC-Ncr-068912 Neurospora crassa 35.96 2.00e-38 153.00
IUUC-Nle-069540 Nomascus leucogenys 86.60 0.00e+00 1022.00
IUUC-Opr-071157 Ochotona princeps 86.33 0.00e+00 1012.00
IUUC-Ont-072229 Oreochromis niloticus 76.93 0.00e+00 957.00
IUUC-Oan-073616 Ornithorhynchus anatinus 91.15 4.00e-31 127.00
IUUC-Ocu-074002 Oryctolagus cuniculus 86.73 0.00e+00 1034.00
IUUC-Oba-075659 Oryza barthii 33.63 2.00e-35 143.00
IUUC-Obr-076465 Oryza brachyantha 43.27 5.00e-34 139.00
IUUC-Ogl-077461 Oryza glaberrima 34.50 1.00e-65 244.00
IUUC-Ogu-078515 Oryza glumaepatula 34.11 2.00e-65 243.00
IUUC-Oin-080201 Oryza indica 37.33 7.00e-47 182.00
IUUC-Olo-080751 Oryza longistaminata 33.33 2.00e-35 143.00
IUUC-Ome-081201 Oryza meridionalis 36.57 2.00e-54 206.00
IUUC-Oni-082951 Oryza nivara 36.99 7.00e-45 175.00
IUUC-Opu-083560 Oryza punctata 36.41 1.00e-53 204.00
IUUC-Oru-084440 Oryza rufipogon 34.43 5.00e-66 245.00
IUUC-Osa-085699 Oryza sativa 34.50 1.00e-65 244.00
IUUC-Ola-086705 Oryzias latipes 74.72 0.00e+00 954.00
IUUC-Olu-087794 Ostreococcus lucimarinus 44.40 2.00e-50 193.00
IUUC-Oga-088896 Otolemur garnettii 86.60 0.00e+00 1024.00
IUUC-Oar-090155 Ovis aries 83.71 0.00e+00 1003.00
IUUC-Ptr-090754 Pan troglodytes 86.73 0.00e+00 1025.00
IUUC-Pan-092464 Papio anubis 86.60 0.00e+00 1022.00
IUUC-Psi-093166 Pelodiscus sinensis 88.09 0.00e+00 706.00
IUUC-Pma-094280 Petromyzon marinus 74.28 2.00e-127 449.00
IUUC-Pno-095106 Phaeosphaeria nodorum 35.52 7.00e-30 125.00
IUUC-Ppa-095510 Physcomitrella patens 45.79 3.00e-56 213.00
IUUC-Pfo-096212 Poecilia formosa 71.80 0.00e+00 787.00
IUUC-Pab-098482 Pongo abelii 86.60 0.00e+00 1022.00
IUUC-Pop-099479 Populus trichocarpa 44.33 3.00e-56 213.00
IUUC-Pca-100776 Procavia capensis 86.21 3.00e-69 256.00
IUUC-Ppe-101595 Prunus persica 43.31 8.00e-59 221.00
IUUC-Pva-102981 Pteropus vampyrus 86.33 0.00e+00 983.00
IUUC-Pgr-103503 Puccinia graminis 32.07 1.00e-64 241.00
IUUC-Ptt-103994 Puccinia triticina 36.30 6.00e-44 172.00
IUUC-Pte-104226 Pyrenophora teres 33.46 9.00e-36 144.00
IUUC-Pyt-104732 Pyrenophora triticirepentis 34.39 2.00e-38 153.00
IUUC-Rno-105225 Rattus norvegicus 85.02 0.00e+00 1021.00
IUUC-Sce-106278 Saccharomyces cerevisiae 22.37 3.00e-10 58.50
IUUC-Sha-107353 Sarcophilus harrisii 83.95 0.00e+00 937.00
IUUC-Sja-107876 Schizosaccharomyces japonicus 38.18 2.00e-50 193.00
IUUC-Spo-108266 Schizosaccharomyces pombe 39.05 1.00e-50 193.00
IUUC-Ssl-108518 Sclerotinia sclerotiorum 42.50 3.00e-54 206.00
IUUC-Smo-109675 Selaginella moellendorffii 41.07 8.00e-50 191.00
IUUC-Sit-110019 Setaria italica 34.48 5.00e-52 199.00
IUUC-Sly-111621 Solanum lycopersicum 44.77 5.00e-63 235.00
IUUC-Stu-112703 Solanum tuberosum 45.09 3.00e-64 239.00
IUUC-Sar-113166 Sorex araneus 83.18 0.00e+00 939.00
IUUC-Sbi-114746 Sorghum bicolor 35.01 3.00e-53 203.00
IUUC-Sre-115196 Sporisorium reilianum 34.51 2.00e-55 210.00
IUUC-Ssc-115573 Sus scrofa 86.99 0.00e+00 1036.00
IUUC-Tgu-117284 Taeniopygia guttata 83.49 0.00e+00 908.00
IUUC-Tru-118236 Takifugu rubripes 75.09 0.00e+00 923.00
IUUC-Tsy-119219 Tarsius syrichta 83.52 0.00e+00 917.00
IUUC-Tni-119929 Tetraodon nigroviridis 82.33 9.00e-107 380.00
IUUC-Tca-121156 Theobroma cacao 44.76 2.00e-59 224.00
IUUC-Tre-122179 Trichoderma reesei 37.45 3.00e-43 169.00
IUUC-Tvi-122326 Trichoderma virens 37.59 1.00e-46 181.00
IUUC-Tae-124313 Triticum aestivum 35.81 2.00e-70 259.00
IUUC-Tur-126352 Triticum urartu 34.20 2.00e-49 190.00
IUUC-Tme-126996 Tuber melanosporum 45.49 1.00e-54 207.00
IUUC-Tbe-127271 Tupaia belangeri 79.89 0.00e+00 898.00
IUUC-Ttr-128433 Tursiops truncatus 86.61 0.00e+00 1033.00
IUUC-Uma-129357 Ustilago maydis 29.75 6.00e-50 192.00
IUUC-Vda-130010 Verticillium dahliae 37.91 3.00e-42 166.00
IUUC-Vvi-131734 Vitis vinifera 44.13 2.00e-62 234.00
IUUC-Xma-134244 Xiphophorus maculatus 75.25 0.00e+00 930.00
IUUC-Yli-134579 Yarrowia lipolytica 32.30 4.00e-30 125.00
IUUC-Zma-135716 Zea mays 34.91 3.00e-54 206.00
Created Date 25-Jun-2017

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