iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006095

Ensembl Protein ID

fgenesh2_kg.3__301__AT3G03550.1

UniProt Accession

D7L170; D7L170_ARALL

Genbank Protein ID

EFH60653.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_477600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__301__AT3G03550.1	fgenesh2_kg.3__301__AT3G03550.1	fgenesh2_kg.3__301__AT3G03550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.1	152	194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f   + +++lp C+H+fh  C+  w       + + +CPlCr
   Q: 152  CSVCLSEFqeNESLRLLPkCNHAFHVPCIDTW------LKSHSNCPLCR 194
           ********6544499999**************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGSTGNPNPW GTYDSYRDCS QGVCSVYCPQ WCYVIFPPPP SFYLDDEDDS SSSDFSPLLI 60
ALIGILASAF ILVSYYTLIS KYCHRRRHNS SSSTSAAVIN RDHGISSDYT WQEATNPNPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAATAG ACACTTACCA GACAAAGCAG ACCCCAGAGA AAAAGGAGAG AGACACTTCA 60
CCTCCATATT CTTTCATCTT CTTCTTCCTC TCTCTCTCGA ACAACAATCA AATAATGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0080167--P:response to karrikin

KEGG

aly:ARALYDRAFT_477600

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006943	Arabidopsis thaliana	88.28	2.00e-158	550.00
IUUC-Bdi-014591	Brachypodium distachyon	48.15	6.00e-43	167.00
IUUC-Bol-016002	Brassica oleracea	62.98	9.00e-92	329.00
IUUC-Bra-016822	Brassica rapa	56.51	3.00e-82	297.00
IUUC-Gma-042838	Glycine max	46.94	4.00e-57	214.00
IUUC-Hvu-047701	Hordeum vulgare	57.21	2.00e-53	202.00
IUUC-Lpe-051459	Leersia perrieri	55.98	2.00e-53	202.00
IUUC-Mtr-058411	Medicago truncatula	41.47	3.00e-57	214.00
IUUC-Mac-065580	Musa acuminata	42.95	6.00e-54	204.00
IUUC-Oba-075056	Oryza barthii	56.73	2.00e-52	198.00
IUUC-Obr-076311	Oryza brachyantha	48.05	5.00e-56	211.00
IUUC-Ogl-077644	Oryza glaberrima	56.73	2.00e-52	199.00
IUUC-Ogu-078989	Oryza glumaepatula	56.73	2.00e-52	199.00
IUUC-Oin-079716	Oryza indica	56.73	2.00e-52	198.00
IUUC-Olo-081066	Oryza longistaminata	50.87	4.00e-53	201.00
IUUC-Ome-081279	Oryza meridionalis	54.23	6.00e-52	197.00
IUUC-Oni-082896	Oryza nivara	56.73	2.00e-52	198.00
IUUC-Opu-083796	Oryza punctata	57.65	1.00e-52	199.00
IUUC-Oru-084594	Oryza rufipogon	57.21	7.00e-53	200.00
IUUC-Osa-086004	Oryza sativa	57.21	6.00e-53	200.00
IUUC-Pop-099293	Populus trichocarpa	47.92	1.00e-67	249.00
IUUC-Ppe-101180	Prunus persica	46.06	2.00e-63	235.00
IUUC-Smo-108989	Selaginella moellendorffii	41.72	4.00e-21	93.60
IUUC-Sit-109894	Setaria italica	49.19	8.00e-57	213.00
IUUC-Sly-111604	Solanum lycopersicum	54.87	7.00e-51	193.00
IUUC-Stu-112707	Solanum tuberosum	62.05	2.00e-52	198.00
IUUC-Sbi-114789	Sorghum bicolor	54.85	1.00e-50	192.00
IUUC-Tca-120979	Theobroma cacao	45.57	3.00e-74	271.00
IUUC-Tae-124557	Triticum aestivum	56.16	3.00e-54	205.00
IUUC-Tur-126697	Triticum urartu	64.37	7.00e-28	117.00
IUUC-Vvi-130829	Vitis vinifera	47.45	2.00e-55	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence