iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069015

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01078508

Gene Name

GNB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000004736.1	ENSNLET00000006050.1	ENSNLEP00000005751.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-36	120.8	53	85
UBD/Beta-Prp	1.10e-50	172.5	46	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH ++++++++ +d +llvs+s Dg++ vWD  
   Q: 53   GHLAKIYAMHWaTDsKLLVSASQDGKLIVWDSY 85
           899*********888***************965 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
            + r+l gh a+++a+ +  d+k+lv++s+D+ + vwd  t   vh++   ++ v+++++ psg++++ G+ d++  +++l++++   +
   Q: 46   RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVK 134
           55689*****************************************************************************9987777 PP
   S: 132  ...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
               ls h+g  +c ++ + +n +v++s D+t  lWd++tg+  + + g ht++  sl+++++ + ++sg++d + klwd+++g+c +t
   Q: 135  vsrELSAHTGYLSCCRFLD-DNNIVTSSGDTTWCLWDIETGQQKTVFVG-HTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQT 221
           778***************9.5668999*********************9.*************************************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           ++gh++ ++ + f+pn+e + +gs+D s r++dlr ++ l +++++
   Q: 222  FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHE 267
           ***************************************9999984 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MGEMEQLRQE AEQLKKQIAI LWKACADVTL AELVSGLEVV GRVQMRTRRT LRGHLAKIYA 60
MHWATDSKLL VSASQDGKLI VWDSYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGGCAGGTG ACGGGCGGGC GCGGGCGTCA CAGCTGAGGG AGTAAAGGAG ACTCCCAGGA 60
ACCGGAGCTG GAAACCCGGC CGAGGTCCAG CCAGAGCCCA AGTAAGAGGG AGCTGGCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002370	Ailuropoda melanoleuca	95.59	0.00e+00	670.00
IUUC-Atr-002610	Amborella trichopoda	48.71	1.00e-84	306.00
IUUC-Apl-004079	Anas platyrhynchos	91.76	0.00e+00	657.00
IUUC-Aca-004539	Anolis carolinensis	89.41	0.00e+00	644.00
IUUC-Bta-012810	Bos taurus	95.88	0.00e+00	670.00
IUUC-Bdi-014785	Brachypodium distachyon	49.36	2.00e-85	308.00
IUUC-Cja-019894	Callithrix jacchus	97.65	0.00e+00	682.00
IUUC-Cfa-020140	Canis familiaris	95.29	0.00e+00	669.00
IUUC-Cpo-021908	Cavia porcellus	95.29	0.00e+00	669.00
IUUC-Csa-023321	Chlorocebus sabaeus	98.53	0.00e+00	686.00
IUUC-Dno-029783	Dasypus novemcinctus	95.18	3.00e-178	617.00
IUUC-Ete-032435	Echinops telfairi	89.12	9.00e-176	608.00
IUUC-Eca-034169	Equus caballus	95.59	0.00e+00	669.00
IUUC-Eeu-034631	Erinaceus europaeus	90.26	1.00e-161	561.00
IUUC-Fca-035392	Felis catus	95.29	0.00e+00	672.00
IUUC-Fal-036902	Ficedula albicollis	89.71	0.00e+00	647.00
IUUC-Gga-040655	Gallus gallus	90.32	0.00e+00	641.00
IUUC-Ggo-045346	Gorilla gorilla	98.53	0.00e+00	686.00
IUUC-Hsa-046203	Homo sapiens	98.53	0.00e+00	686.00
IUUC-Hvu-047596	Hordeum vulgare	49.36	3.00e-84	305.00
IUUC-Itr-048501	Ictidomys tridecemlineatus	94.71	0.00e+00	665.00
IUUC-Lpe-051040	Leersia perrieri	49.04	6.00e-86	310.00
IUUC-Loc-052327	Lepisosteus oculatus	86.76	0.00e+00	627.00
IUUC-Laf-053616	Loxodonta africana	95.00	0.00e+00	667.00
IUUC-Mcc-055798	Macaca mulatta	98.53	0.00e+00	686.00
IUUC-Mga-059516	Meleagris gallopavo	91.76	0.00e+00	656.00
IUUC-Mmr-061701	Microcebus murinus	95.88	0.00e+00	672.00
IUUC-Mdo-061879	Monodelphis domestica	92.35	0.00e+00	654.00
IUUC-Mmu-063132	Mus musculus	95.59	0.00e+00	669.00
IUUC-Mac-064871	Musa acuminata	48.72	2.00e-82	299.00
IUUC-Mpu-066365	Mustela putorius furo	95.29	0.00e+00	671.00
IUUC-Mlu-067628	Myotis lucifugus	95.00	0.00e+00	666.00
IUUC-Ncr-068650	Neurospora crassa	64.33	1.00e-126	446.00
IUUC-Opr-070261	Ochotona princeps	96.18	0.00e+00	672.00
IUUC-Ocu-074255	Oryctolagus cuniculus	96.18	0.00e+00	673.00
IUUC-Oba-075818	Oryza barthii	47.38	8.00e-83	300.00
IUUC-Ogl-077730	Oryza glaberrima	49.36	2.00e-86	311.00
IUUC-Ogu-078583	Oryza glumaepatula	48.85	6.00e-68	250.00
IUUC-Oin-079661	Oryza indica	48.72	2.00e-82	298.00
IUUC-Olo-080225	Oryza longistaminata	48.85	6.00e-68	250.00
IUUC-Oni-082161	Oryza nivara	49.04	7.00e-86	310.00
IUUC-Opu-084072	Oryza punctata	49.36	3.00e-86	311.00
IUUC-Oru-084316	Oryza rufipogon	48.72	2.00e-82	298.00
IUUC-Osa-085380	Oryza sativa	48.72	2.00e-82	298.00
IUUC-Oga-088685	Otolemur garnettii	96.18	0.00e+00	672.00
IUUC-Oar-089373	Ovis aries	92.67	0.00e+00	634.00
IUUC-Ptr-090627	Pan troglodytes	95.88	0.00e+00	665.00
IUUC-Pan-092347	Papio anubis	98.53	0.00e+00	684.00
IUUC-Psi-092965	Pelodiscus sinensis	91.76	0.00e+00	657.00
IUUC-Pab-098335	Pongo abelii	97.94	0.00e+00	684.00
IUUC-Pop-099370	Populus trichocarpa	49.03	2.00e-85	309.00
IUUC-Pva-102666	Pteropus vampyrus	96.18	0.00e+00	673.00
IUUC-Rno-105834	Rattus norvegicus	95.00	0.00e+00	632.00
IUUC-Sha-107128	Sarcophilus harrisii	92.35	0.00e+00	652.00
IUUC-Sly-111784	Solanum lycopersicum	49.03	5.00e-83	301.00
IUUC-Stu-112400	Solanum tuberosum	49.03	5.00e-83	301.00
IUUC-Sbi-114038	Sorghum bicolor	48.40	2.00e-84	305.00
IUUC-Ssc-115886	Sus scrofa	95.88	0.00e+00	670.00
IUUC-Tgu-116461	Taeniopygia guttata	90.29	0.00e+00	651.00
IUUC-Tae-124407	Triticum aestivum	49.68	2.00e-84	305.00
IUUC-Tur-126755	Triticum urartu	49.20	5.00e-85	309.00
IUUC-Tbe-127694	Tupaia belangeri	79.41	3.00e-143	500.00
IUUC-Xtr-132928	Xenopus tropicalis	87.06	8.00e-175	605.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence