iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014515

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100821755; BRADI_1g08294

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G08294	BRADI1G08294.1	BRADI1G08294.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-32	109.6	121	154
UBD/Beta-Prp	7.60e-58	196.6	119	382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H++ v+c +f +d ++l++Gs+D +ik +++ + 
   Q: 121  HKNVVRCAKFsPDgRYLATGSGDTSIKFFEVPKI 154
           999********999**************998665 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tg 84
           ++hk+v++c kfspd+++latgs d +ik ++v + k               +r++++h++++++++f+p  +il+++++D+tik +d+s   ++
   Q: 119  SDHKNVVRCAKFSPDGRYLATGSGDTSIKFFEVPKIKQtisadskegsvrpvVRTFYDHTQPINDLDFHPINPILISAAKDNTIKFFDFSktaAR 213
           57999****************************999999************************************************99966677 PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           k +++++  +++v+s+ f+psgd++++G+++ +++++d++t +c+ +   +  ++++n v+++++g+l+v++s+D+ +r+Wd ++++++r   g+
   Q: 214  KAFRVIQ-DTHNVRSICFHPSGDYILAGTDHPVAHLYDVNTFTCYLSsNPQDSSAAINQVRYSGTGSLYVTASKDGSLRIWDGASAECVRPIVGA 307
           7777777.*************************************98777888899************************************998 PP
   S: 179  htds.vyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfs.pnderlvsgssDgsiriWd 250
           h ++  +s +f+++ ++++s+++d+++klw++ tg+ v+++ g    + ++ +++ + +e+++s  + +++ iWd
   Q: 308  HASAeATSAIFTKDERYILSCGKDSSIKLWEVGTGRLVKQYAGAVnGQLRCQAVFnESEEFVLSIDEQNVVVIWD 382
           8765167778********************************96625556655554888899999999******8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDAAVQEAKL LRQVNALIVA HLREQNLTQA ATAVAAATMT PLSPAKADAS LPNHLLRLVA 60
KGLAAERDEG GGAPATFESA ADGGGGLGRP LGTNAVDFSM QGVSGSSKSF PKHESKHISD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCAG CGGTGCAGGA GGCGAAGCTG CTGCGGCAGG TGAACGCCCT CATCGTGGCG 60
CACCTCCGGG AGCAGAACCT CACGCAGGCT GCCACCGCCG TCGCCGCCGC CACCATGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	43.43	3.00e-79	288.00
IUUC-Atr-002687	Amborella trichopoda	55.42	4.00e-147	513.00
IUUC-Apl-003438	Anas platyrhynchos	43.43	9.00e-80	289.00
IUUC-Aca-005178	Anolis carolinensis	43.73	6.00e-80	290.00
IUUC-Aly-005791	Arabidopsis lyrata	61.02	6.00e-150	523.00
IUUC-Ath-006689	Arabidopsis thaliana	61.72	2.00e-152	531.00
IUUC-Ame-011217	Astyanax mexicanus	47.89	2.00e-69	254.00
IUUC-Bta-012619	Bos taurus	43.43	2.00e-79	288.00
IUUC-Bra-017450	Brassica rapa	53.10	3.00e-140	490.00
IUUC-Cel-018151	Caenorhabditis elegans	41.18	1.00e-67	249.00
IUUC-Cja-019304	Callithrix jacchus	43.43	1.00e-79	289.00
IUUC-Cfa-020208	Canis familiaris	43.43	3.00e-79	288.00
IUUC-Cpo-022245	Cavia porcellus	43.43	3.00e-79	288.00
IUUC-Csa-023066	Chlorocebus sabaeus	43.43	1.00e-79	289.00
IUUC-Cho-024770	Choloepus hoffmanni	43.43	5.00e-79	287.00
IUUC-Cin-025621	Ciona intestinalis	38.67	2.00e-67	248.00
IUUC-Csv-026071	Ciona savignyi	42.25	8.00e-74	270.00
IUUC-Dre-028254	Danio rerio	42.51	3.00e-76	278.00
IUUC-Dno-029903	Dasypus novemcinctus	43.43	3.00e-79	288.00
IUUC-Dor-030423	Dipodomys ordii	43.43	3.00e-79	288.00
IUUC-Dme-031993	Drosophila melanogaster	40.50	9.00e-68	249.00
IUUC-Eca-033316	Equus caballus	43.43	3.00e-79	288.00
IUUC-Eeu-035001	Erinaceus europaeus	42.26	8.00e-78	283.00
IUUC-Fca-036447	Felis catus	43.43	3.00e-79	288.00
IUUC-Fal-037601	Ficedula albicollis	43.43	9.00e-80	289.00
IUUC-Gmo-038531	Gadus morhua	40.36	3.00e-72	264.00
IUUC-Gga-040869	Gallus gallus	43.43	2.00e-79	289.00
IUUC-Gac-042380	Gasterosteus aculeatus	42.01	3.00e-76	278.00
IUUC-Gma-043478	Glycine max	64.98	2.00e-162	564.00
IUUC-Ggo-045302	Gorilla gorilla	43.43	1.00e-79	289.00
IUUC-Hsa-045678	Homo sapiens	43.43	1.00e-79	289.00
IUUC-Hvu-047301	Hordeum vulgare	82.05	0.00e+00	662.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	43.43	3.00e-79	288.00
IUUC-Lch-050319	Latimeria chalumnae	43.43	3.00e-79	288.00
IUUC-Lpe-051440	Leersia perrieri	64.50	1.00e-164	571.00
IUUC-Loc-052035	Lepisosteus oculatus	44.04	6.00e-79	286.00
IUUC-Laf-054275	Loxodonta africana	43.43	3.00e-79	288.00
IUUC-Mcc-055857	Macaca mulatta	37.96	2.00e-59	222.00
IUUC-Mtr-058667	Medicago truncatula	62.65	5.00e-151	526.00
IUUC-Mga-059710	Meleagris gallopavo	43.43	2.00e-79	289.00
IUUC-Mmr-060604	Microcebus murinus	43.43	3.00e-79	288.00
IUUC-Mdo-062953	Monodelphis domestica	43.43	2.00e-79	288.00
IUUC-Mmu-064292	Mus musculus	43.12	4.00e-79	287.00
IUUC-Mac-064568	Musa acuminata	72.67	4.00e-151	526.00
IUUC-Mpu-066294	Mustela putorius furo	47.62	4.00e-54	204.00
IUUC-Mlu-067279	Myotis lucifugus	43.43	5.00e-80	290.00
IUUC-Nle-069322	Nomascus leucogenys	43.43	1.00e-79	289.00
IUUC-Opr-070580	Ochotona princeps	43.43	3.00e-79	288.00
IUUC-Ont-072554	Oreochromis niloticus	43.43	3.00e-78	284.00
IUUC-Oan-072856	Ornithorhynchus anatinus	43.73	8.00e-80	290.00
IUUC-Ocu-074150	Oryctolagus cuniculus	44.58	2.00e-63	235.00
IUUC-Oba-075585	Oryza barthii	72.67	5.00e-178	616.00
IUUC-Obr-076069	Oryza brachyantha	79.95	0.00e+00	652.00
IUUC-Ogl-077045	Oryza glaberrima	79.95	0.00e+00	668.00
IUUC-Ogu-078697	Oryza glumaepatula	79.86	0.00e+00	643.00
IUUC-Oin-080119	Oryza indica	79.95	0.00e+00	668.00
IUUC-Olo-081093	Oryza longistaminata	62.97	8.00e-109	388.00
IUUC-Ome-081718	Oryza meridionalis	69.82	2.00e-156	545.00
IUUC-Oni-082072	Oryza nivara	72.67	5.00e-178	616.00
IUUC-Opu-084080	Oryza punctata	69.91	5.00e-148	516.00
IUUC-Oru-085070	Oryza rufipogon	75.63	6.00e-177	614.00
IUUC-Osa-086149	Oryza sativa	79.95	0.00e+00	668.00
IUUC-Ola-086697	Oryzias latipes	42.51	2.00e-77	281.00
IUUC-Oga-088697	Otolemur garnettii	43.43	3.00e-79	288.00
IUUC-Oar-089774	Ovis aries	43.43	4.00e-79	288.00
IUUC-Ptr-090924	Pan troglodytes	43.43	1.00e-79	289.00
IUUC-Pan-092373	Papio anubis	43.43	2.00e-79	289.00
IUUC-Psi-094001	Pelodiscus sinensis	43.43	1.00e-79	289.00
IUUC-Pma-094274	Petromyzon marinus	39.35	3.00e-72	265.00
IUUC-Ppa-095562	Physcomitrella patens	63.08	2.00e-152	530.00
IUUC-Pfo-097235	Poecilia formosa	43.43	2.00e-77	282.00
IUUC-Pab-098608	Pongo abelii	43.43	1.00e-79	289.00
IUUC-Pca-100268	Procavia capensis	43.43	2.00e-79	288.00
IUUC-Ppe-101425	Prunus persica	64.30	3.00e-160	557.00
IUUC-Pva-103183	Pteropus vampyrus	43.43	3.00e-79	288.00
IUUC-Rno-105097	Rattus norvegicus	43.12	4.00e-79	287.00
IUUC-Sha-107642	Sarcophilus harrisii	43.43	2.00e-79	288.00
IUUC-Smo-108680	Selaginella moellendorffii	58.14	9.00e-134	469.00
IUUC-Sit-110471	Setaria italica	79.72	0.00e+00	669.00
IUUC-Sly-111143	Solanum lycopersicum	56.65	8.00e-74	269.00
IUUC-Stu-111926	Solanum tuberosum	71.88	1.00e-67	247.00
IUUC-Sar-112947	Sorex araneus	44.53	6.00e-63	233.00
IUUC-Sbi-113769	Sorghum bicolor	79.30	0.00e+00	645.00
IUUC-Ssc-115736	Sus scrofa	43.43	3.00e-79	288.00
IUUC-Tgu-117457	Taeniopygia guttata	43.43	9.00e-80	289.00
IUUC-Tru-117760	Takifugu rubripes	43.12	3.00e-78	285.00
IUUC-Tsy-118943	Tarsius syrichta	43.12	8.00e-76	276.00
IUUC-Tni-120081	Tetraodon nigroviridis	43.12	3.00e-78	285.00
IUUC-Tca-121190	Theobroma cacao	65.98	1.00e-166	578.00
IUUC-Tae-125535	Triticum aestivum	82.56	0.00e+00	659.00
IUUC-Tur-126329	Triticum urartu	85.80	2.00e-176	611.00
IUUC-Tbe-127878	Tupaia belangeri	43.47	2.00e-78	285.00
IUUC-Ttr-128985	Tursiops truncatus	43.43	3.00e-79	288.00
IUUC-Vpa-130147	Vicugna pacos	43.43	4.00e-79	287.00
IUUC-Vvi-130935	Vitis vinifera	65.83	1.00e-164	571.00
IUUC-Xtr-132482	Xenopus tropicalis	43.43	2.00e-79	288.00
IUUC-Xma-133929	Xiphophorus maculatus	43.43	2.00e-77	282.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence