iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076588

Ensembl Protein ID

OB04G29930.1

UniProt Accession

J3M0R8; J3M0R8_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB04G29930	OB04G29930.1	OB04G29930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.80e-21	75.6	483	554

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p +flCp++ ++++ Pv++++G+t++r +I +w+++g k cP+t+q+l++ ++   n +l+rli++w +en
   Q: 483  IPNDFLCPLTRQIFNRPVTIETGQTFERHAIVQWFDRGIKMCPITGQELESLSIpDINRVLKRLIDNWKSEN 554
           89***********************************************999997779**********9987 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAPPPSSLLR DLLAADGFRT RRKPPDSNPP AAPRTSSMPL QHRRPSRPAR SQSDVLTRSL 60
LRETNDVGTS GGNGIDVADE EQQNATRRSS ASLTSARSYS NNKDTISGAT KGSAAIPALD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCGC CGCCGTCGTC ATTGCTCCGC GACCTCCTCG CCGCTGATGG CTTCAGGACC 60
CGTCGCAAGC CGCCTGACAG TAACCCTCCC GCCGCCCCAA GGACCTCGAG CATGCCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	37.08	5.00e-77	282.00
IUUC-Bdi-014999	Brachypodium distachyon	63.36	0.00e+00	728.00
IUUC-Gma-044073	Glycine max	30.95	6.00e-104	371.00
IUUC-Hvu-047722	Hordeum vulgare	60.08	0.00e+00	873.00
IUUC-Lpe-051567	Leersia perrieri	70.12	0.00e+00	1146.00
IUUC-Mtr-058670	Medicago truncatula	30.40	2.00e-110	393.00
IUUC-Mac-065130	Musa acuminata	38.81	1.00e-84	307.00
IUUC-Oba-075449	Oryza barthii	76.81	0.00e+00	1313.00
IUUC-Ogu-078984	Oryza glumaepatula	75.68	0.00e+00	1276.00
IUUC-Olo-080563	Oryza longistaminata	76.65	0.00e+00	938.00
IUUC-Ome-081747	Oryza meridionalis	75.41	0.00e+00	1327.00
IUUC-Oni-082227	Oryza nivara	76.30	0.00e+00	1300.00
IUUC-Opu-083803	Oryza punctata	80.33	0.00e+00	1353.00
IUUC-Oru-084717	Oryza rufipogon	76.40	0.00e+00	1306.00
IUUC-Osa-085390	Oryza sativa	81.25	0.00e+00	1066.00
IUUC-Pop-099189	Populus trichocarpa	38.49	2.00e-75	276.00
IUUC-Ppe-101493	Prunus persica	36.36	2.00e-123	436.00
IUUC-Sit-110010	Setaria italica	59.82	2.00e-178	618.00
IUUC-Stu-112239	Solanum tuberosum	36.26	4.00e-84	304.00
IUUC-Sbi-113947	Sorghum bicolor	60.86	0.00e+00	675.00
IUUC-Tca-121435	Theobroma cacao	40.71	4.00e-91	328.00
IUUC-Tae-125513	Triticum aestivum	61.64	0.00e+00	966.00
IUUC-Tur-126526	Triticum urartu	57.85	1.00e-122	432.00
IUUC-Vvi-130964	Vitis vinifera	41.04	5.00e-89	322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence