iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112338

Ensembl Protein ID

PGSC0003DMT400016233

UniProt Accession

M1A7B4; M1A7B4_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006344	PGSC0003DMT400016233	PGSC0003DMT400016233

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-07	32.3	194	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f   ++ + +pC+H++h dC+  w       s + +CP+Cr
   Q: 194  CAVCKEAFelGTEAREMPCKHLYHSDCILPW------LSLRNSCPVCR 235
           ******9977445899***************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSSTYWCYRC NRFYRVWSEE SIACPDCNTG FVEEIEAPTR STLSGSRRRR IPPAVMQTAA 60
RSTEQSPASG YGSGSSPGVR RNRRNTGDRS PFNPVIVLRG STNGGGAGGE GGGGGGGGFE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTCTCCTT CCATCTCTCC ATTTTCCCCC ACTCTCTCTC CCTATCCTAA AATATTCCCT 60
CATTTTCAAA TTTTGCTCAA CAATTTCAAT TCTAAGTCAA AGTTTTTTGC TATTTTCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sot:102605063

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003131	Amborella trichopoda	58.17	9.00e-84	302.00
IUUC-Bol-015736	Brassica oleracea	51.13	1.00e-69	255.00
IUUC-Bra-017069	Brassica rapa	51.54	8.00e-70	256.00
IUUC-Mtr-057892	Medicago truncatula	58.51	1.00e-88	318.00
IUUC-Mac-065350	Musa acuminata	55.45	1.00e-81	295.00
IUUC-Ogl-077103	Oryza glaberrima	52.86	1.00e-83	302.00
IUUC-Ome-081205	Oryza meridionalis	52.45	2.00e-83	301.00
IUUC-Oni-082393	Oryza nivara	52.45	1.00e-81	295.00
IUUC-Oru-084888	Oryza rufipogon	52.45	1.00e-81	295.00
IUUC-Osa-085474	Oryza sativa	62.21	2.00e-76	277.00
IUUC-Pop-100030	Populus trichocarpa	59.04	3.00e-76	277.00
IUUC-Ppe-101788	Prunus persica	59.94	1.00e-89	322.00
IUUC-Sly-110949	Solanum lycopersicum	98.23	3.00e-156	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence