iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114371

UUCD1 version

UUC-SoB-01332

Ensembl Protein ID

Sb09g030900.1

UniProt Accession

A0A1B6PMX6; A0A1B6PMX6_SORBI

Genbank Protein ID

KXG27003.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G194700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g030900	Sb09g030900.1	Sb09g030900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-08	35.5	140	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f+d   +++lp C H+fh+dC+ +w       + +++CPlCr
   Q: 140  CSVCLARFDDAdlLRLLPrCHHAFHLDCVDRW------LQSSASCPLCR 182
           ********77666777889*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MALPVPGQQL ALLAVLFSAA AVAAAQPTTD ELSASPAADN NSAPAGVGIK VSFRPRVAIV 60
VGIFTMIFSL TFILLMYAKF CHPSSSPSPA ASALVGGGET GGNNGAAAAA AAVGVPKQVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCTGC CGGTGCCGGG CCAGCAGCTC GCTCTCCTCG CGGTCCTCTT CTCTGCGGCC 60
GCCGTGGCCG CAGCGCAGCC GACCACCGAC GAGCTGTCTG CATCTCCGGC GGCGGATAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002959	Amborella trichopoda	45.91	5.00e-40	157.00
IUUC-Aly-006498	Arabidopsis lyrata	37.59	5.00e-46	177.00
IUUC-Ath-006742	Arabidopsis thaliana	36.06	2.00e-43	168.00
IUUC-Bol-015696	Brassica oleracea	34.10	3.00e-37	148.00
IUUC-Bra-017430	Brassica rapa	34.10	9.00e-36	143.00
IUUC-Gma-042792	Glycine max	32.25	2.00e-50	192.00
IUUC-Hvu-047489	Hordeum vulgare	52.57	2.00e-75	275.00
IUUC-Lpe-051018	Leersia perrieri	53.33	6.00e-78	283.00
IUUC-Mtr-057998	Medicago truncatula	32.46	6.00e-43	167.00
IUUC-Mac-064701	Musa acuminata	40.93	1.00e-61	229.00
IUUC-Oba-075667	Oryza barthii	60.82	6.00e-68	250.00
IUUC-Obr-076167	Oryza brachyantha	54.52	3.00e-64	237.00
IUUC-Ogl-077500	Oryza glaberrima	60.82	6.00e-68	250.00
IUUC-Ogu-078252	Oryza glumaepatula	61.07	4.00e-64	237.00
IUUC-Ome-081414	Oryza meridionalis	61.07	2.00e-65	241.00
IUUC-Oni-082687	Oryza nivara	60.82	6.00e-68	250.00
IUUC-Opu-084088	Oryza punctata	55.45	1.00e-85	309.00
IUUC-Oru-084787	Oryza rufipogon	60.52	1.00e-68	253.00
IUUC-Osa-085704	Oryza sativa	60.82	6.00e-68	250.00
IUUC-Pop-099837	Populus trichocarpa	35.10	1.00e-44	172.00
IUUC-Ppe-101585	Prunus persica	31.37	3.00e-49	188.00
IUUC-Sit-110634	Setaria italica	64.08	1.00e-114	405.00
IUUC-Sly-111270	Solanum lycopersicum	31.57	4.00e-50	191.00
IUUC-Stu-111967	Solanum tuberosum	34.22	2.00e-57	215.00
IUUC-Tca-121197	Theobroma cacao	33.96	8.00e-55	206.00
IUUC-Tae-125327	Triticum aestivum	51.81	3.00e-73	267.00
IUUC-Vvi-131412	Vitis vinifera	33.64	1.00e-50	192.00
IUUC-Yli-134656	Yarrowia lipolytica	41.07	2.00e-11	63.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence