iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131041

UUCD1 version

UUC-ViV-00851

Ensembl Protein ID

VIT_14s0066g01870.t01

UniProt Accession

F6HV30; F6HV30_VITVI

Genbank Protein ID

CCB58548.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596252

Gene Name

VIT_14s0066g01870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_14s0066g01870	VIT_14s0066g01870.t01	VIT_14s0066g01870.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-17	63.9	28	98

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+eflCpIs+ lM dPv+++sG+t++r++++ + a g +     +++ + ++++Pnl+++++i +wc++ 
   Q: 28   PPKEFLCPISGSLMADPVIVSSGQTFERACVQVCKALGFNPTLSEGSSPDFSTIIPNLAIQSTILSWCDKC 98
           79************************************9978888888888899**************975 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGNGKQRWRV FYKSSSSSNA SKRQSKEPPK EFLCPISGSL MADPVIVSSG QTFERACVQV 60
CKALGFNPTL SEGSSPDFST IIPNLAIQST ILSWCDKCSV DRPKPLDFDS AEKVVRTLMA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTAATG GGAAGCAGAG GTGGAGGGTG TTTTACAAGT CGTCTTCTTC TTCCAATGCG 60
TCAAAACGCC AGTCCAAGGA ACCGCCCAAG GAGTTTCTGT GTCCCATTTC TGGGTCTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	50.00	3.00e-84	305.00
IUUC-Aly-005518	Arabidopsis lyrata	57.59	2.00e-146	511.00
IUUC-Ath-006703	Arabidopsis thaliana	57.09	5.00e-153	533.00
IUUC-Bdi-014649	Brachypodium distachyon	37.46	2.00e-83	302.00
IUUC-Bol-015923	Brassica oleracea	58.05	3.00e-140	491.00
IUUC-Bra-016715	Brassica rapa	59.84	1.00e-128	452.00
IUUC-Hvu-047842	Hordeum vulgare	39.58	4.00e-20	92.00
IUUC-Lpe-050893	Leersia perrieri	37.78	6.00e-71	260.00
IUUC-Mac-064560	Musa acuminata	39.79	4.00e-71	261.00
IUUC-Oba-075532	Oryza barthii	46.36	6.00e-41	161.00
IUUC-Ogl-077033	Oryza glaberrima	37.25	2.00e-58	218.00
IUUC-Ogu-078087	Oryza glumaepatula	42.06	1.00e-41	163.00
IUUC-Oin-079818	Oryza indica	40.08	7.00e-39	153.00
IUUC-Olo-080764	Oryza longistaminata	42.22	3.00e-32	131.00
IUUC-Ome-081313	Oryza meridionalis	37.65	1.00e-59	223.00
IUUC-Oni-082747	Oryza nivara	37.45	5.00e-59	221.00
IUUC-Opu-084021	Oryza punctata	37.96	4.00e-65	241.00
IUUC-Oru-084445	Oryza rufipogon	37.45	2.00e-58	220.00
IUUC-Osa-085410	Oryza sativa	37.45	3.00e-59	221.00
IUUC-Ppa-095595	Physcomitrella patens	42.43	9.00e-50	191.00
IUUC-Ppe-101810	Prunus persica	66.74	1.00e-164	572.00
IUUC-Sit-109782	Setaria italica	36.95	8.00e-68	249.00
IUUC-Sly-111131	Solanum lycopersicum	60.12	2.00e-160	557.00
IUUC-Stu-112864	Solanum tuberosum	61.38	3.00e-154	537.00
IUUC-Sbi-113814	Sorghum bicolor	36.80	7.00e-56	210.00
IUUC-Tca-121304	Theobroma cacao	63.22	7.00e-168	582.00
IUUC-Tae-124240	Triticum aestivum	39.37	1.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence