iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121813

Ensembl Protein ID

EOY02600

UniProt Accession

A0A061EDW4; A0A061EDW4_THECC

Genbank Protein ID

EOY02599.1; EOY02600.1; EOY02601.1; EOY02602.1

Protein Name

NF-X-like 1 isoform 1

Genbank Nucleotide ID

CM001882; CM001882; CM001882; CM001882

Gene Name

TCM_017029

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_017029	EOY02600	EOY02600

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	37.89	1.00e-124	445.00	IUUC-Hsa-046870

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSNSETMSFQ GRNRPRNPSQ STRQEWVPRG SSSTTTTVVS SSPGASNSTP IVNHTSTRND 60
NRNRQIGRST NHRRDKEKER SENHVVVKEI DPNLPQLVQE IQDKLIRSTV ECMICYDTVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGATCATC CCGGAGACAA AAACGGTCCC GACTCCCGAC CAGAACGAAC AACTTTACCC 60
TAAATCCCTA ACACCCTTTG CTTTCCCCCT TTCCGGCAGG TCACCGGCTC GCCCACAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR034078--NFX1_fam
IPR001374--R3H_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR000967--Znf_NFX1
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF01422--zf-NF-X1

SMART

SM00438--ZnF_NFX

Gene Ontology

GO:0005634--C:nucleus
GO:0000166--F:nucleotide binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000224	Aegilops tauschii	63.91	0.00e+00	912.00
IUUC-Aml-001716	Ailuropoda melanoleuca	37.55	2.00e-116	413.00
IUUC-Atr-002895	Amborella trichopoda	59.48	0.00e+00	1198.00
IUUC-Apl-003650	Anas platyrhynchos	38.30	4.00e-123	435.00
IUUC-Aca-004313	Anolis carolinensis	34.74	1.00e-127	450.00
IUUC-Aly-006515	Arabidopsis lyrata	68.57	0.00e+00	1389.00
IUUC-Ath-007056	Arabidopsis thaliana	67.43	0.00e+00	1376.00
IUUC-Ago-007777	Ashbya gossypii	29.94	4.00e-76	278.00
IUUC-Acl-008068	Aspergillus clavatus	34.43	1.00e-65	244.00
IUUC-Afl-008499	Aspergillus flavus	33.60	2.00e-40	159.00
IUUC-Afu-009016	Aspergillus fumigatus	33.18	1.00e-101	364.00
IUUC-Ani-009477	Aspergillus nidulans	32.44	2.00e-101	363.00
IUUC-Ang-009605	Aspergillus niger	33.62	2.00e-101	363.00
IUUC-Aor-010166	Aspergillus oryzae	33.11	2.00e-46	179.00
IUUC-Ame-010640	Astyanax mexicanus	39.14	3.00e-127	449.00
IUUC-Bgr-012024	Blumeria graminis	30.10	7.00e-100	358.00
IUUC-Bta-012789	Bos taurus	37.64	2.00e-115	409.00
IUUC-Bci-013768	Botrytis cinerea	30.79	2.00e-100	360.00
IUUC-Bdi-014723	Brachypodium distachyon	61.36	0.00e+00	1209.00
IUUC-Bol-015394	Brassica oleracea	67.66	0.00e+00	1400.00
IUUC-Bra-017266	Brassica rapa	67.69	0.00e+00	1395.00
IUUC-Cel-018668	Caenorhabditis elegans	34.43	1.00e-108	387.00
IUUC-Cja-019769	Callithrix jacchus	35.27	3.00e-108	385.00
IUUC-Cfa-020727	Canis familiaris	36.67	1.00e-111	397.00
IUUC-Cpo-021741	Cavia porcellus	36.43	3.00e-113	402.00
IUUC-Csa-024054	Chlorocebus sabaeus	37.77	3.00e-122	432.00
IUUC-Cho-025031	Choloepus hoffmanni	34.26	2.00e-101	362.00
IUUC-Cin-025164	Ciona intestinalis	36.22	4.00e-108	385.00
IUUC-Csv-026260	Ciona savignyi	36.22	4.00e-114	405.00
IUUC-Cgl-026451	Colletotrichum gloeosporioides	33.39	1.00e-72	267.00
IUUC-Cne-026923	Cryptococcus neoformans	28.68	3.00e-59	223.00
IUUC-Dre-028227	Danio rerio	37.85	1.00e-126	446.00
IUUC-Dno-029830	Dasypus novemcinctus	36.10	1.00e-113	403.00
IUUC-Dor-030436	Dipodomys ordii	31.57	1.00e-82	300.00
IUUC-Dse-031485	Dothistroma septosporum	35.66	1.00e-112	400.00
IUUC-Dme-031875	Drosophila melanogaster	35.05	6.00e-100	358.00
IUUC-Eca-033415	Equus caballus	39.37	6.00e-52	197.00
IUUC-Eeu-034528	Erinaceus europaeus	34.87	6.00e-73	268.00
IUUC-Fca-036238	Felis catus	37.98	6.00e-113	400.00
IUUC-Fal-037124	Ficedula albicollis	39.37	2.00e-133	469.00
IUUC-Fox-038075	Fusarium oxysporum	27.88	2.00e-09	57.40
IUUC-Fso-038310	Fusarium solani	36.65	5.00e-89	322.00
IUUC-Gmo-039506	Gadus morhua	36.79	3.00e-119	422.00
IUUC-Ggr-039984	Gaeumannomyces graminis	34.51	6.00e-107	381.00
IUUC-Gga-040674	Gallus gallus	38.00	6.00e-121	427.00
IUUC-Gac-041416	Gasterosteus aculeatus	38.32	3.00e-123	435.00
IUUC-Gma-043625	Glycine max	69.25	0.00e+00	1385.00
IUUC-Ggo-045017	Gorilla gorilla	37.82	1.00e-119	423.00
IUUC-Hsa-046870	Homo sapiens	37.89	1.00e-122	433.00
IUUC-Hvu-047466	Hordeum vulgare	62.47	0.00e+00	870.00
IUUC-Itr-048703	Ictidomys tridecemlineatus	38.85	2.00e-19	89.00
IUUC-Kpa-049244	Komagataella pastoris	28.36	9.00e-61	228.00
IUUC-Lch-050376	Latimeria chalumnae	37.97	2.00e-124	439.00
IUUC-Lpe-050955	Leersia perrieri	58.16	0.00e+00	1056.00
IUUC-Loc-051948	Lepisosteus oculatus	37.50	3.00e-133	468.00
IUUC-Lma-052950	Leptosphaeria maculans	33.58	3.00e-107	382.00
IUUC-Laf-054206	Loxodonta africana	39.74	3.00e-70	259.00
IUUC-Mcc-055005	Macaca mulatta	37.53	5.00e-122	431.00
IUUC-Meu-056120	Macropus eugenii	37.67	2.00e-57	217.00
IUUC-Mor-057238	Magnaporthe oryzae	34.86	5.00e-113	402.00
IUUC-Mpo-057574	Magnaporthe poae	34.31	5.00e-105	375.00
IUUC-Mtr-057823	Medicago truncatula	66.60	0.00e+00	1240.00
IUUC-Mla-058822	Melampsora laricipopulina	29.63	4.00e-80	292.00
IUUC-Mga-059785	Meleagris gallopavo	41.10	1.00e-75	276.00
IUUC-Mvi-060543	Microbotryum violaceum	29.27	2.00e-86	313.00
IUUC-Mmr-060611	Microcebus murinus	36.09	1.00e-104	373.00
IUUC-Mdo-062719	Monodelphis domestica	37.76	1.00e-124	440.00
IUUC-Mmu-064376	Mus musculus	36.48	3.00e-116	412.00
IUUC-Mac-064834	Musa acuminata	60.55	0.00e+00	1067.00
IUUC-Mpu-066298	Mustela putorius furo	38.04	8.00e-118	417.00
IUUC-Mlu-067546	Myotis lucifugus	35.90	2.00e-114	406.00
IUUC-Nfi-068388	Neosartorya fischeri	34.17	2.00e-108	386.00
IUUC-Ncr-068875	Neurospora crassa	34.55	7.00e-107	381.00
IUUC-Nle-069813	Nomascus leucogenys	37.89	9.00e-123	434.00
IUUC-Opr-070995	Ochotona princeps	36.89	2.00e-117	416.00
IUUC-Ont-072084	Oreochromis niloticus	35.69	2.00e-112	399.00
IUUC-Oan-073545	Ornithorhynchus anatinus	36.41	2.00e-110	392.00
IUUC-Ocu-074092	Oryctolagus cuniculus	34.95	5.00e-121	428.00
IUUC-Oba-075828	Oryza barthii	60.14	0.00e+00	1123.00
IUUC-Obr-076373	Oryza brachyantha	61.05	0.00e+00	899.00
IUUC-Ogl-077043	Oryza glaberrima	62.31	0.00e+00	1167.00
IUUC-Ogu-078647	Oryza glumaepatula	62.17	0.00e+00	1150.00
IUUC-Oin-079793	Oryza indica	62.68	0.00e+00	926.00
IUUC-Olo-080815	Oryza longistaminata	62.45	0.00e+00	1127.00
IUUC-Ome-081650	Oryza meridionalis	62.83	0.00e+00	1209.00
IUUC-Oni-082708	Oryza nivara	62.52	0.00e+00	1196.00
IUUC-Opu-084078	Oryza punctata	61.76	0.00e+00	1151.00
IUUC-Oru-084549	Oryza rufipogon	62.62	0.00e+00	1199.00
IUUC-Osa-086095	Oryza sativa	63.24	0.00e+00	1054.00
IUUC-Olu-087617	Ostreococcus lucimarinus	23.08	2.00e-02	33.90
IUUC-Oga-088453	Otolemur garnettii	37.88	2.00e-118	420.00
IUUC-Oar-089769	Ovis aries	37.35	8.00e-115	407.00
IUUC-Ptr-090803	Pan troglodytes	37.89	1.00e-122	433.00
IUUC-Pan-092169	Papio anubis	36.65	6.00e-123	434.00
IUUC-Psi-094065	Pelodiscus sinensis	38.24	4.00e-131	462.00
IUUC-Pma-094592	Petromyzon marinus	35.99	3.00e-111	395.00
IUUC-Pno-095016	Phaeosphaeria nodorum	35.04	1.00e-15	76.30
IUUC-Ppa-095597	Physcomitrella patens	50.71	0.00e+00	910.00
IUUC-Pfo-096959	Poecilia formosa	38.57	1.00e-127	450.00
IUUC-Pab-097732	Pongo abelii	37.70	5.00e-95	341.00
IUUC-Pop-099062	Populus trichocarpa	74.18	0.00e+00	1506.00
IUUC-Pca-100219	Procavia capensis	32.70	3.00e-72	266.00
IUUC-Ppe-101695	Prunus persica	73.20	0.00e+00	1535.00
IUUC-Pva-102402	Pteropus vampyrus	36.61	1.00e-91	331.00
IUUC-Pgr-103317	Puccinia graminis	28.33	6.00e-75	275.00
IUUC-Ptt-103771	Puccinia triticina	28.84	8.00e-77	281.00
IUUC-Pte-104189	Pyrenophora teres	27.64	4.00e-10	58.90
IUUC-Pyt-104801	Pyrenophora triticirepentis	34.62	5.00e-112	398.00
IUUC-Rno-105721	Rattus norvegicus	36.72	8.00e-124	437.00
IUUC-Sce-106350	Saccharomyces cerevisiae	29.60	2.00e-68	253.00
IUUC-Sha-106801	Sarcophilus harrisii	35.19	1.00e-125	444.00
IUUC-Sja-107692	Schizosaccharomyces japonicus	31.88	4.00e-100	358.00
IUUC-Spo-108253	Schizosaccharomyces pombe	32.78	5.00e-95	342.00
IUUC-Ssl-108587	Sclerotinia sclerotiorum	35.83	3.00e-71	261.00
IUUC-Smo-108865	Selaginella moellendorffii	51.05	0.00e+00	830.00
IUUC-Sit-110153	Setaria italica	62.24	0.00e+00	1182.00
IUUC-Sly-111638	Solanum lycopersicum	71.82	0.00e+00	1351.00
IUUC-Stu-112099	Solanum tuberosum	70.44	0.00e+00	1363.00
IUUC-Sar-113030	Sorex araneus	34.22	2.00e-37	150.00
IUUC-Sbi-113944	Sorghum bicolor	61.58	0.00e+00	1196.00
IUUC-Sre-115206	Sporisorium reilianum	30.53	2.00e-90	326.00
IUUC-Ssc-115729	Sus scrofa	38.62	7.00e-19	87.80
IUUC-Tgu-117520	Taeniopygia guttata	35.32	1.00e-101	363.00
IUUC-Tru-118487	Takifugu rubripes	37.93	7.00e-121	427.00
IUUC-Tsy-119363	Tarsius syrichta	32.93	5.00e-90	325.00
IUUC-Tre-122248	Trichoderma reesei	33.33	6.00e-91	328.00
IUUC-Tvi-122462	Trichoderma virens	35.50	9.00e-105	374.00
IUUC-Tae-123637	Triticum aestivum	59.80	0.00e+00	1146.00
IUUC-Tur-126173	Triticum urartu	63.56	0.00e+00	1095.00
IUUC-Tme-127213	Tuber melanosporum	31.17	3.00e-86	313.00
IUUC-Tbe-127399	Tupaia belangeri	37.37	6.00e-72	265.00
IUUC-Ttr-128798	Tursiops truncatus	36.04	2.00e-65	243.00
IUUC-Uma-129421	Ustilago maydis	29.48	3.00e-90	326.00
IUUC-Vda-129863	Verticillium dahliae	32.58	1.00e-94	340.00
IUUC-Vvi-131615	Vitis vinifera	71.83	0.00e+00	1519.00
IUUC-Xtr-132309	Xenopus tropicalis	39.32	4.00e-124	438.00
IUUC-Xma-133235	Xiphophorus maculatus	38.57	9.00e-126	444.00
IUUC-Yli-134536	Yarrowia lipolytica	30.09	6.00e-80	291.00
IUUC-Zma-135358	Zea mays	59.76	0.00e+00	1113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence