iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112113

Ensembl Protein ID

PGSC0003DMT400050559

UniProt Accession

M1BQI3; M1BQI3_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400019649	PGSC0003DMT400050559	PGSC0003DMT400050559

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-23	82.5	194	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e f Cp+++++M+dPv+++sG+ty+r +I +w++++ +      cP+ +q+l+ ++l  n +l+++i++w e+n+
   Q: 194  LYETFFCPLTKKIMEDPVTIESGVTYERDAISEWINKSDNnreeiFCPKSGQKLKGRSLSTNVALKATIDEWKERNE 270
           5799*******************************7777778999****************************9997 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MELQIGKNAT SNVIEKLQSM FENVHLANEM IKKCQKYRQK NQLIEPSIVI EQLQVVNRHI 60
AEGLSLIPSC FYGEQECAET AVKSLLKDMK GAAAFVARKN LISEQTELEV NMLHSRELMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTTAGCAT ACTTGCTGAA TCCTTGTTGG CAAATATTTC AGAGTTCACA AAATCAGTAG 60
TTTCAATAGA TGTTGAAAAA GAGAATTTCA TTGAGATTGG AAGCTACTTA TACCGCGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	38.05	0.00e+00	634.00
IUUC-Atr-002664	Amborella trichopoda	41.77	0.00e+00	672.00
IUUC-Aly-006424	Arabidopsis lyrata	54.05	0.00e+00	845.00
IUUC-Ath-006596	Arabidopsis thaliana	52.55	0.00e+00	802.00
IUUC-Bdi-014572	Brachypodium distachyon	42.03	0.00e+00	698.00
IUUC-Bol-016179	Brassica oleracea	53.30	0.00e+00	813.00
IUUC-Bra-017617	Brassica rapa	53.67	0.00e+00	814.00
IUUC-Hvu-047800	Hordeum vulgare	41.96	0.00e+00	678.00
IUUC-Lpe-050817	Leersia perrieri	40.69	0.00e+00	690.00
IUUC-Mac-065538	Musa acuminata	44.40	0.00e+00	672.00
IUUC-Oba-075004	Oryza barthii	40.67	0.00e+00	693.00
IUUC-Obr-076391	Oryza brachyantha	39.57	1.00e-173	602.00
IUUC-Ogl-077375	Oryza glaberrima	40.67	0.00e+00	693.00
IUUC-Ogu-078488	Oryza glumaepatula	40.67	0.00e+00	692.00
IUUC-Oin-079369	Oryza indica	44.77	0.00e+00	682.00
IUUC-Olo-080998	Oryza longistaminata	44.23	0.00e+00	635.00
IUUC-Ome-081243	Oryza meridionalis	40.38	0.00e+00	688.00
IUUC-Oni-082268	Oryza nivara	40.48	0.00e+00	693.00
IUUC-Opu-083388	Oryza punctata	41.21	0.00e+00	703.00
IUUC-Oru-084387	Oryza rufipogon	40.67	0.00e+00	695.00
IUUC-Osa-086255	Oryza sativa	40.24	0.00e+00	693.00
IUUC-Pop-099505	Populus trichocarpa	53.85	0.00e+00	958.00
IUUC-Ppe-101776	Prunus persica	57.45	0.00e+00	1029.00
IUUC-Sit-110322	Setaria italica	41.39	0.00e+00	660.00
IUUC-Sly-111047	Solanum lycopersicum	95.93	0.00e+00	1877.00
IUUC-Sbi-113818	Sorghum bicolor	39.78	0.00e+00	626.00
IUUC-Tca-121365	Theobroma cacao	57.06	0.00e+00	1002.00
IUUC-Tae-124087	Triticum aestivum	41.56	0.00e+00	672.00
IUUC-Tur-126161	Triticum urartu	41.36	0.00e+00	667.00
IUUC-Vvi-131502	Vitis vinifera	60.25	0.00e+00	946.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence