iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113982

UUCD1 version

UUC-SoB-01717

Ensembl Protein ID

Sb10g026010.1

UniProt Accession

A0A194YKN0; A0A194YKN0_SORBI

Genbank Protein ID

KXG20513.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G213500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g026010	Sb10g026010.1	Sb10g026010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.40e-74	251.3	186	493

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           +Gl N gN+C+ N vLQcLs +++l ++ll   ++++++ +   +++ ++l++lq  ++   +++ + ++p+++l++l ++  ++   +q+Da+Ef
   Q: 186  CGLMNCGNSCFANVVLQCLSCTRPLVSYLLGkDHSRECSMR---HEDWCFLCELQCHIHRA-SGSLHPFAPTNILSHLPNIGGNLGFGRQEDAHEF 277
           7*****************************95566667664...7899***********99.9999****************************** PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcL 191
           ++f +d++++++         +e          e+  +  ++++++i+++F+g+l+sq++c +c+ vs+r+++++dl+++++g+ e    sl++cL
   Q: 278  MRFAIDKMQSAC--------LDE-------YGGEKAVDLSTQETTIIQHIFGGRLQSQVQCTACGMVSNRYDNMMDLTVEIQGDAE----SLEKCL 354
           ************........222.......2233567789999******************************************7....8***** PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
           ++ft+ e l+g+nky+c+ c+++++a+k l++++ P++L++ LkRf    + ++  k+nk+v+fp eLdl+p+++ ++     ++ Y+L+avvvH 
   Q: 355  DQFTAIEWLDGDNKYKCDGCNDYVKARKHLSVHQAPNILTITLKRF----QSGRFGKLNKRVTFPMELDLTPYTSCTDG----SDLYDLYAVVVHL 442
           **********************************************....346668*****************998554....67**********9 PP
   S: 288  Gslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkrr 338
             l+    GHY++y+k  +g+W+++dD kV +v+eeev     + aY+l+Y rr
   Q: 443  DMLNAsffGHYICYIKGYQGRWYKIDDCKVMVVDEEEVHA---QGAYMLLYSRR 493
           95554455********************************...********985 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MALPACTTQC PTMEGFRLAV HVDLLAAVVG LVLFSAAVVA VRRAASRYFV VDAAGFAASY 60
DDHHHDPMGN PQEQGAAAAD LMGPCAACGG VASKKCSRCK RVRYCSQECQ TNHWQSDHKF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTTGC CTGCGTGCAC CACGCAATGC CCAACAATGG AAGGGTTTAG ACTCGCTGTT 60
CACGTTGATC TCTTGGTAGG TATGGAAAGA GCAAAATGCG AGATGCTTTG ATGACTCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	60.67	0.00e+00	918.00
IUUC-Atr-002997	Amborella trichopoda	60.28	6.00e-147	513.00
IUUC-Aly-005942	Arabidopsis lyrata	61.64	1.00e-152	532.00
IUUC-Ath-007334	Arabidopsis thaliana	58.40	4.00e-161	560.00
IUUC-Bdi-014660	Brachypodium distachyon	55.50	0.00e+00	972.00
IUUC-Bol-015083	Brassica oleracea	61.19	5.00e-160	556.00
IUUC-Bra-017569	Brassica rapa	62.85	7.00e-162	563.00
IUUC-Gma-042920	Glycine max	62.23	1.00e-166	579.00
IUUC-Hvu-047620	Hordeum vulgare	61.94	0.00e+00	1030.00
IUUC-Lpe-051385	Leersia perrieri	53.99	0.00e+00	881.00
IUUC-Mtr-057748	Medicago truncatula	61.42	2.00e-163	568.00
IUUC-Mac-065096	Musa acuminata	71.43	8.00e-170	590.00
IUUC-Oba-075131	Oryza barthii	59.65	0.00e+00	992.00
IUUC-Obr-076763	Oryza brachyantha	59.27	0.00e+00	1002.00
IUUC-Ogl-077264	Oryza glaberrima	60.24	0.00e+00	1042.00
IUUC-Ogu-078646	Oryza glumaepatula	60.45	0.00e+00	1043.00
IUUC-Oin-079613	Oryza indica	58.33	0.00e+00	990.00
IUUC-Olo-080250	Oryza longistaminata	60.85	0.00e+00	1051.00
IUUC-Ome-081416	Oryza meridionalis	60.24	0.00e+00	1041.00
IUUC-Oni-082102	Oryza nivara	60.34	0.00e+00	1040.00
IUUC-Opu-083135	Oryza punctata	60.57	0.00e+00	1009.00
IUUC-Oru-084644	Oryza rufipogon	60.45	0.00e+00	1044.00
IUUC-Osa-086195	Oryza sativa	59.96	0.00e+00	1003.00
IUUC-Ppa-095936	Physcomitrella patens	65.38	9.00e-130	457.00
IUUC-Pop-099232	Populus trichocarpa	62.05	1.00e-171	595.00
IUUC-Ppe-101845	Prunus persica	64.73	3.00e-157	547.00
IUUC-Smo-109625	Selaginella moellendorffii	53.06	4.00e-135	474.00
IUUC-Sit-109798	Setaria italica	70.21	0.00e+00	1319.00
IUUC-Sly-111333	Solanum lycopersicum	59.96	1.00e-169	589.00
IUUC-Stu-112696	Solanum tuberosum	59.10	2.00e-109	388.00
IUUC-Tca-121521	Theobroma cacao	68.54	2.00e-172	598.00
IUUC-Tae-123937	Triticum aestivum	60.95	0.00e+00	1062.00
IUUC-Tur-126423	Triticum urartu	61.73	0.00e+00	966.00
IUUC-Vvi-130927	Vitis vinifera	48.74	7.00e-170	590.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence