iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116436

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU464072

Gene Name

RNF111

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000004589.2	ENSSSCT00000005070.2	ENSSSCP00000004946.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	30.6	942	983

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+ +++g  ++ lpC H+fh+ C+ +w        ++ +CP+Cr
   Q: 942  CTICLSILEEGedVRRLPCMHLFHQVCVDQW------LITNKKCPICR 983
           9*****9944444******************......**********8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSQWTPEYNK LYTIKVDMKS DIPSDAPKTQ ESLKGILLHP EPIGAAKNFP AGVEMINSKV 60
GNEFSHLCDD SQKQEKDMNG NQQEQEKSVV RKKRKSQQAG PSYMQNCAKE NQGILGLRQH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGCGAACTG TCGTAAAGCC CCCGAGTGTC GTGCTTGCTC GGGAGAGGAG GGATTGGTTA 60
GGCGGCGGCG GCGGCGGTGG CCGGAGAGCG GCAGCAGTGG CGGCGACGGT GGCGAGGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029306--RNF111_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF15303--RNF111_N
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043234--C:protein complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007389--P:pattern specification process
GO:0031398--P:positive regulation of protein ubiquitination
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0030511--P:positive regulation of transforming growth factor beta receptor signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030579--P:ubiquitin-dependent SMAD protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000605	Aegilops tauschii	50.94	5.00e-14	70.50
IUUC-Aml-001378	Ailuropoda melanoleuca	95.02	0.00e+00	1469.00
IUUC-Atr-003149	Amborella trichopoda	58.00	9.00e-16	74.70
IUUC-Apl-003634	Anas platyrhynchos	83.87	0.00e+00	1277.00
IUUC-Aca-004574	Anolis carolinensis	75.26	4.00e-125	441.00
IUUC-Ath-007520	Arabidopsis thaliana	35.51	2.00e-15	75.90
IUUC-Acl-008067	Aspergillus clavatus	44.64	2.00e-10	60.80
IUUC-Ang-009544	Aspergillus niger	53.33	3.00e-10	60.80
IUUC-Ate-010250	Aspergillus terreus	51.11	6.00e-10	59.70
IUUC-Bta-012823	Bos taurus	96.08	0.00e+00	1500.00
IUUC-Bdi-014777	Brachypodium distachyon	59.09	4.00e-13	67.80
IUUC-Cja-018850	Callithrix jacchus	89.78	0.00e+00	1312.00
IUUC-Cfa-021062	Canis familiaris	95.48	0.00e+00	1470.00
IUUC-Cpo-021467	Cavia porcellus	86.62	0.00e+00	1360.00
IUUC-Csa-024048	Chlorocebus sabaeus	94.28	0.00e+00	1435.00
IUUC-Cho-024278	Choloepus hoffmanni	91.94	2.00e-147	516.00
IUUC-Cme-027312	Cyanidioschyzon merolae	58.33	5.00e-12	65.10
IUUC-Dre-028323	Danio rerio	50.89	2.00e-159	556.00
IUUC-Dno-028850	Dasypus novemcinctus	90.48	0.00e+00	1367.00
IUUC-Dme-031973	Drosophila melanogaster	38.24	2.00e-25	111.00
IUUC-Ete-032985	Echinops telfairi	90.97	2.00e-119	422.00
IUUC-Eca-033659	Equus caballus	95.78	0.00e+00	1518.00
IUUC-Eeu-034773	Erinaceus europaeus	84.87	0.00e+00	766.00
IUUC-Fca-035560	Felis catus	95.58	0.00e+00	1422.00
IUUC-Fal-037598	Ficedula albicollis	81.06	0.00e+00	1256.00
IUUC-Gmo-038696	Gadus morhua	70.77	9.00e-66	244.00
IUUC-Gga-040900	Gallus gallus	82.97	0.00e+00	1263.00
IUUC-Gac-041830	Gasterosteus aculeatus	53.11	7.00e-172	597.00
IUUC-Gma-043396	Glycine max	50.00	5.00e-14	70.10
IUUC-Ggo-044921	Gorilla gorilla	94.93	0.00e+00	1507.00
IUUC-Hsa-046529	Homo sapiens	95.78	0.00e+00	1508.00
IUUC-Itr-048765	Ictidomys tridecemlineatus	95.28	0.00e+00	1437.00
IUUC-Lch-049512	Latimeria chalumnae	71.07	0.00e+00	1007.00
IUUC-Lpe-050764	Leersia perrieri	52.94	8.00e-13	66.20
IUUC-Loc-052174	Lepisosteus oculatus	56.19	0.00e+00	686.00
IUUC-Laf-053804	Loxodonta africana	93.17	0.00e+00	1343.00
IUUC-Mcc-055297	Macaca mulatta	94.67	0.00e+00	1473.00
IUUC-Meu-056052	Macropus eugenii	82.56	4.00e-121	429.00
IUUC-Mtr-058136	Medicago truncatula	55.32	3.00e-13	67.80
IUUC-Mga-059350	Meleagris gallopavo	83.87	0.00e+00	1286.00
IUUC-Mmr-061666	Microcebus murinus	94.37	0.00e+00	1467.00
IUUC-Mdo-061958	Monodelphis domestica	87.26	0.00e+00	1328.00
IUUC-Mmu-063900	Mus musculus	87.64	0.00e+00	1323.00
IUUC-Mac-065281	Musa acuminata	31.71	6.00e-11	59.30
IUUC-Mpu-066492	Mustela putorius furo	95.18	0.00e+00	1476.00
IUUC-Mlu-067464	Myotis lucifugus	94.48	0.00e+00	1424.00
IUUC-Nfi-068528	Neosartorya fischeri	51.11	6.00e-10	59.30
IUUC-Nle-070038	Nomascus leucogenys	94.83	0.00e+00	1509.00
IUUC-Opr-070924	Ochotona princeps	82.23	0.00e+00	787.00
IUUC-Ont-072297	Oreochromis niloticus	53.23	2.00e-101	363.00
IUUC-Oan-072897	Ornithorhynchus anatinus	66.74	0.00e+00	879.00
IUUC-Ocu-074713	Oryctolagus cuniculus	93.62	0.00e+00	1456.00
IUUC-Oba-074994	Oryza barthii	32.46	4.00e-13	69.30
IUUC-Obr-076337	Oryza brachyantha	32.11	2.00e-13	70.10
IUUC-Ogl-077817	Oryza glaberrima	32.46	4.00e-13	69.30
IUUC-Ogu-077954	Oryza glumaepatula	32.46	4.00e-13	69.30
IUUC-Oin-079127	Oryza indica	34.62	5.00e-13	69.30
IUUC-Olo-080304	Oryza longistaminata	32.46	4.00e-13	69.30
IUUC-Ome-081451	Oryza meridionalis	34.62	6.00e-13	69.30
IUUC-Oni-082765	Oryza nivara	32.46	4.00e-13	69.30
IUUC-Opu-084108	Oryza punctata	34.62	4.00e-13	69.70
IUUC-Oru-084289	Oryza rufipogon	32.46	4.00e-13	69.30
IUUC-Osa-085712	Oryza sativa	32.46	4.00e-13	69.30
IUUC-Ola-087455	Oryzias latipes	51.97	3.00e-174	605.00
IUUC-Oga-088809	Otolemur garnettii	95.20	0.00e+00	1514.00
IUUC-Oar-090286	Ovis aries	94.98	0.00e+00	1508.00
IUUC-Ptr-091451	Pan troglodytes	94.93	0.00e+00	1503.00
IUUC-Pan-092593	Papio anubis	94.59	0.00e+00	1450.00
IUUC-Psi-093662	Pelodiscus sinensis	81.21	0.00e+00	892.00
IUUC-Pma-094624	Petromyzon marinus	59.07	3.00e-66	246.00
IUUC-Pfo-096611	Poecilia formosa	52.18	2.00e-176	613.00
IUUC-Pab-097885	Pongo abelii	94.58	0.00e+00	1466.00
IUUC-Pca-100561	Procavia capensis	77.44	0.00e+00	738.00
IUUC-Pva-102891	Pteropus vampyrus	96.18	0.00e+00	1569.00
IUUC-Rno-105327	Rattus norvegicus	88.44	0.00e+00	1358.00
IUUC-Sha-107401	Sarcophilus harrisii	86.85	0.00e+00	1333.00
IUUC-Sar-113238	Sorex araneus	87.83	0.00e+00	892.00
IUUC-Sbi-114185	Sorghum bicolor	50.94	2.00e-14	71.20
IUUC-Tgu-116470	Taeniopygia guttata	81.62	0.00e+00	1197.00
IUUC-Tru-118054	Takifugu rubripes	48.30	1.00e-155	543.00
IUUC-Tni-120063	Tetraodon nigroviridis	52.43	2.00e-174	606.00
IUUC-Tae-125027	Triticum aestivum	58.33	1.00e-14	72.80
IUUC-Tur-126415	Triticum urartu	53.70	2.00e-14	71.60
IUUC-Tbe-128026	Tupaia belangeri	89.23	0.00e+00	1257.00
IUUC-Ttr-128623	Tursiops truncatus	92.27	0.00e+00	1406.00
IUUC-Uma-129481	Ustilago maydis	35.53	4.00e-10	61.60
IUUC-Vpa-130662	Vicugna pacos	93.06	0.00e+00	1499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence