iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2775__AT2G04240.2	fgenesh2_kg.3__2775__AT2G04240.2	fgenesh2_kg.3__2775__AT2G04240.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	35.3	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f  + +   l CgH+fh++Cl+kw       + +++CPlCr
   Q: 102  CSVCLSKFegDSEINKLKCGHLFHKTCLEKW-----IDYWNITCPLCR 144
           ********7744477899*************.....6999*******8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGLSSLPGPS EGMLCVILVN TALSISIVKG IVRSVLGIVG ISLSPSSSSP SSVTASSENP 60
TSEPFDFRVC QPESFLEEFR NRTPTLRFES LCRCKKQEDN ECSVCLSKFE GDSEINKLKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCACACCC AATAAAAACT TCATCTTTCT TGTAAATTGT TGATGATCGC TTCTCATATT 60
TGACTCTAGA GGTTCGTAGT TTTCTCTAAA GTTTCGATTT TTCCCCAATT TTTAACCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0009687--P:abscisic acid metabolic process
GO:0010200--P:response to chitin
GO:0009739--P:response to gibberellin
GO:0009651--P:response to salt stress

KEGG

aly:ARALYDRAFT_480074

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002705	Amborella trichopoda	46.53	1.00e-31	127.00
IUUC-Ath-006955	Arabidopsis thaliana	92.59	1.00e-71	260.00
IUUC-Bdi-014597	Brachypodium distachyon	35.14	2.00e-18	84.30
IUUC-Bol-015727	Brassica oleracea	83.33	3.00e-70	256.00
IUUC-Bra-017460	Brassica rapa	80.12	2.00e-65	239.00
IUUC-Gma-043655	Glycine max	66.89	4.00e-48	182.00
IUUC-Hvu-047116	Hordeum vulgare	57.78	6.00e-15	72.40
IUUC-Lpe-051313	Leersia perrieri	34.90	6.00e-20	89.40
IUUC-Mtr-058124	Medicago truncatula	58.39	9.00e-44	168.00
IUUC-Mac-064673	Musa acuminata	45.52	1.00e-24	104.00
IUUC-Oba-075151	Oryza barthii	57.78	3.00e-13	67.00
IUUC-Ogl-077775	Oryza glaberrima	34.46	4.00e-19	86.70
IUUC-Ogu-078543	Oryza glumaepatula	57.50	7.00e-12	62.40
IUUC-Oin-079546	Oryza indica	34.46	4.00e-19	86.70
IUUC-Ome-081882	Oryza meridionalis	54.35	5.00e-13	66.60
IUUC-Oni-082196	Oryza nivara	34.46	4.00e-19	86.70
IUUC-Opu-083519	Oryza punctata	34.64	7.00e-21	92.40
IUUC-Oru-084312	Oryza rufipogon	34.46	4.00e-19	86.70
IUUC-Osa-086234	Oryza sativa	34.46	4.00e-19	86.70
IUUC-Pop-099448	Populus trichocarpa	66.89	1.00e-48	184.00
IUUC-Ppe-101936	Prunus persica	64.05	3.00e-44	170.00
IUUC-Sit-110820	Setaria italica	28.75	5.00e-14	69.70
IUUC-Sly-111064	Solanum lycopersicum	44.92	1.00e-26	110.00
IUUC-Stu-112754	Solanum tuberosum	49.36	1.00e-37	147.00
IUUC-Sbi-114815	Sorghum bicolor	33.33	1.00e-16	78.20
IUUC-Tca-121106	Theobroma cacao	64.19	9.00e-47	178.00
IUUC-Tae-125056	Triticum aestivum	35.81	4.00e-15	73.20
IUUC-Vvi-131394	Vitis vinifera	62.16	1.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence