iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114293

UUCD1 version

UUC-SoB-00451

Ensembl Protein ID

Sb02g021790.1

UniProt Accession

C5X9S8; C5X9S6; C5X9S8_SORBI

Genbank Protein ID

EER98730.2; EER98732.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761; CM000761

Gene Name

SORBI_002G170200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g021790	Sb02g021790.1	Sb02g021790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-07	31.6	339	380

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ +  +d+++ lpC H+fh +C+ kw       + ++ CPlC+
   Q: 339  CCICLTKYgdDDELRELPCTHFFHVQCVDKW------LKINAVCPLCK 380
           ********99777******************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEHASCDDVH EHVISVAHGE TASTSTSHQD MYSDSDEPHQ EDRQSTSTQT PSSESSPSIS 60
PIAYSSRNLS FPRRDSIYGH GRSPWNSGLW ISFEVVMYIA QVVAAIVILV FSRHEHPHAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCCTTCC TCCTCCATTC CTTCCTCGTG GTCAGGCTCA GGCACGCCGA GCATCCGCAC 60
CGCACCTGCT CGCCCGATCA CCCCGGCGGT TTCTTCTCCC CTTCGCCCCC CCGTGCGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g021770; sbi:SORBI_02g021790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000682	Aegilops tauschii	79.40	9.00e-153	531.00
IUUC-Bdi-014014	Brachypodium distachyon	85.54	0.00e+00	632.00
IUUC-Lpe-051240	Leersia perrieri	82.44	3.00e-162	563.00
IUUC-Oba-075173	Oryza barthii	84.10	0.00e+00	640.00
IUUC-Obr-076511	Oryza brachyantha	84.58	5.00e-180	622.00
IUUC-Ogl-077768	Oryza glaberrima	84.10	0.00e+00	640.00
IUUC-Ogu-079003	Oryza glumaepatula	83.86	0.00e+00	643.00
IUUC-Oin-080078	Oryza indica	83.86	0.00e+00	637.00
IUUC-Olo-080997	Oryza longistaminata	83.44	2.00e-152	531.00
IUUC-Ome-081347	Oryza meridionalis	84.03	0.00e+00	627.00
IUUC-Oni-082074	Oryza nivara	83.86	0.00e+00	640.00
IUUC-Opu-083173	Oryza punctata	84.11	0.00e+00	627.00
IUUC-Oru-084340	Oryza rufipogon	83.86	0.00e+00	639.00
IUUC-Osa-085476	Oryza sativa	83.86	0.00e+00	637.00
IUUC-Pma-094624	Petromyzon marinus	31.06	2.00e-12	67.40
IUUC-Sit-109799	Setaria italica	92.77	0.00e+00	690.00
IUUC-Tae-125590	Triticum aestivum	83.61	0.00e+00	662.00
IUUC-Tur-126401	Triticum urartu	70.26	5.00e-148	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence