iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114878

Ensembl Protein ID

Sb02g032360.1

UniProt Accession

C5X7R5; C5X7R5_SORBI

Genbank Protein ID

EER99330.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G292500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g032360	Sb02g032360.1	Sb02g032360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.10e-41	140.9	1	76
ULD/UDP/UBQ/UBQ_PIM	1.50e-27	96.1	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkql+d++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL DDGRTLADYN 60
IQKESTLHLV LRLRGGSRGG YPTTISPSLR ELAQKYNENK MVCRKCYARL PPRATNCRKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGATCT TCGTGAAGAC GCTGACGGGG AAGACGATCA CGCTGGAGGT GGAGAGCAGC 60
GACACCATCG ACAACGTGAA GGCGAAGATC CAGGACAAGG AAGGCATCCC GCCGGACCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001975--Ribosomal_L40e
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01377--Ribosomal_L40e
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

sbi:SORBI_02g032360

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001006	Aegilops tauschii	61.33	3.00e-48	183.00
IUUC-Bdi-014207	Brachypodium distachyon	88.57	8.00e-71	259.00
IUUC-Hvu-047579	Hordeum vulgare	74.81	1.00e-56	210.00
IUUC-Lpe-051472	Leersia perrieri	86.62	2.00e-60	226.00
IUUC-Oba-075506	Oryza barthii	88.49	4.00e-61	225.00
IUUC-Obr-076200	Oryza brachyantha	79.71	7.00e-55	204.00
IUUC-Ogl-077897	Oryza glaberrima	88.49	4.00e-61	225.00
IUUC-Ogu-078327	Oryza glumaepatula	92.06	1.00e-56	213.00
IUUC-Oin-080077	Oryza indica	89.21	3.00e-62	229.00
IUUC-Ome-081622	Oryza meridionalis	89.21	3.00e-62	229.00
IUUC-Oni-082301	Oryza nivara	90.20	6.00e-37	145.00
IUUC-Opu-083839	Oryza punctata	77.54	1.00e-46	180.00
IUUC-Osa-085747	Oryza sativa	89.21	3.00e-62	229.00
IUUC-Sit-110503	Setaria italica	95.00	5.00e-65	238.00
IUUC-Tae-123868	Triticum aestivum	88.49	4.00e-71	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence