iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132373

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Novel C3HC4 type (RING finger) and B-box zinc finger protein with SPRY domain

Genbank Nucleotide ID

AAMC01062199

Gene Name

XB-GENE-5729272; LOC100124771; TNeu058i17.1-001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000026378.1	ENSXETT00000006971.2	ENSXETP00000006971.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.10e-06	26.0	7	78
E3 activity/RING/RING	2.30e-08	34.6	12	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqpltee.dlvPnltlrrliqawc 69
            +e+ C+I l+l +dP +lp+G+ + + + e+ l+s+++    +cP +r++++e+ +l  n +l ++ ++++
   Q: 7    RDELTCSICLNLYTDPIMLPCGHNFCQGCAERLLDSQEEsdgySCPECRAEFQERpELQRNRALGNIAEHFR 78
           5899******************************999999999********966515577888777766665 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ + d p+ lpCgH f++ C +++ + ++++s   +CP Cr
   Q: 12   CSICLNLYTD-PIMLPCGHNFCQGCAERL-LDSQEESDGYSCPECR 55
           **********.999***************.99999**********8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MAAAGVRDEL TCSICLNLYT DPIMLPCGHN FCQGCAERLL DSQEESDGYS CPECRAEFQE 60
RPELQRNRAL GNIAEHFRPN KGEQGGSDIC CTYCVCSSVA AAKSCLHCEA SLCDTHLRVH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGATGCGA GGGCTACAGA CCAGAGGGAG GCCATGATCA GCTGGCTTGT CGGTAGCTAT 60
AATCATGTCG ACTTTGTTAT TAATCTGTAA ATGTAAATAG TGTAAATGTA TTGTTTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

xtr:100124771

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005401	Arabidopsis lyrata	42.42	2.00e-07	50.10
IUUC-Mtr-058792	Medicago truncatula	45.71	6.00e-09	55.50
IUUC-Ogl-077562	Oryza glaberrima	42.86	2.00e-08	53.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence