iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000003604.2	ENSLACT00000004084.2	ENSLACP00000004048.2
ENSLACG00000003604.2	ENSLACT00000004085.1	ENSLACP00000004049.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.40e-20	73.0	206	243
ULD/UDP/UBQ/UBQ_PIM	2.90e-19	69.0	25	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e +++++++MG++re+++ aLra++nn+++AveyLl+g
   Q: 206  ENMVAEIMSMGYEREQVVAALRASFNNPDRAVEYLLTG 243
           779*********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 13   felevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksks 76
           ++++ s +  v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt+L+e++i+++++++++v+k+ks
   Q: 25   LKIDTSVQFVVKALKEKIESEKGkdaFPVAGQKLIYAGKILSDDTPLKEYKIDEKNFIVVMVTKPKS 91
           5677888889******************************************************985 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

AITTIQTLNQ AHLSFGFSLT KALDLKIDTS VQFVVKALKE KIESEKGKDA FPVAGQKLIY 60
AGKILSDDTP LKEYKIDEKN FIVVMVTKPK SASGTAAQPA TQSTASTTTA TTTTTTATTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGCCTGCA CCACCTGAAA AAGAAGGGAA GGGTGGACTT ACTTGCAAGA CAAAGGACAA 60
ATATAATTTT TAGCCTGGAC TAAGGGACAT CTTCTTTCAC TGATCCATGC AAAACAATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.84	3.00e-37	149.00
IUUC-Aml-001195	Ailuropoda melanoleuca	74.70	4.00e-77	281.00
IUUC-Atr-003116	Amborella trichopoda	38.84	9.00e-34	137.00
IUUC-Apl-003371	Anas platyrhynchos	74.19	3.00e-84	305.00
IUUC-Aca-004599	Anolis carolinensis	69.53	1.00e-80	293.00
IUUC-Aly-005498	Arabidopsis lyrata	42.21	5.00e-43	168.00
IUUC-Ath-006676	Arabidopsis thaliana	41.63	3.00e-43	169.00
IUUC-Ago-007830	Ashbya gossypii	31.14	1.00e-19	90.90
IUUC-Afu-008877	Aspergillus fumigatus	39.75	2.00e-29	122.00
IUUC-Ani-009460	Aspergillus nidulans	42.02	8.00e-35	140.00
IUUC-Bta-012922	Bos taurus	79.49	3.00e-82	298.00
IUUC-Bol-016493	Brassica oleracea	40.93	3.00e-41	162.00
IUUC-Bra-017582	Brassica rapa	41.77	1.00e-41	163.00
IUUC-Cja-018772	Callithrix jacchus	72.39	2.00e-82	299.00
IUUC-Cfa-020683	Canis familiaris	72.28	4.00e-81	294.00
IUUC-Cpo-022145	Cavia porcellus	79.57	4.00e-86	311.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	38.68	1.00e-32	133.00
IUUC-Csa-023714	Chlorocebus sabaeus	73.06	3.00e-89	322.00
IUUC-Cho-024814	Choloepus hoffmanni	58.67	1.00e-61	229.00
IUUC-Cin-025741	Ciona intestinalis	43.75	1.00e-40	159.00
IUUC-Dre-028369	Danio rerio	70.49	5.00e-83	301.00
IUUC-Dno-029543	Dasypus novemcinctus	72.39	5.00e-83	301.00
IUUC-Dse-031336	Dothistroma septosporum	55.00	4.00e-20	92.40
IUUC-Ete-032583	Echinops telfairi	63.83	2.00e-57	216.00
IUUC-Eca-034243	Equus caballus	78.21	4.00e-81	295.00
IUUC-Eeu-034721	Erinaceus europaeus	76.28	7.00e-61	227.00
IUUC-Fca-035679	Felis catus	73.41	1.00e-80	293.00
IUUC-Fal-037148	Ficedula albicollis	72.13	7.00e-80	290.00
IUUC-Gga-040544	Gallus gallus	69.74	3.00e-83	301.00
IUUC-Gma-043937	Glycine max	38.75	1.00e-43	170.00
IUUC-Ggo-045125	Gorilla gorilla	75.20	2.00e-84	306.00
IUUC-Hsa-046519	Homo sapiens	75.20	2.00e-84	306.00
IUUC-Hvu-047832	Hordeum vulgare	40.08	7.00e-38	151.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	75.32	1.00e-75	276.00
IUUC-Lpe-050801	Leersia perrieri	38.08	7.00e-38	150.00
IUUC-Loc-051748	Lepisosteus oculatus	72.24	2.00e-81	295.00
IUUC-Laf-054293	Loxodonta africana	72.39	3.00e-81	295.00
IUUC-Mcc-055600	Macaca mulatta	73.13	1.00e-87	316.00
IUUC-Mtr-058148	Medicago truncatula	36.80	8.00e-42	164.00
IUUC-Mga-060060	Meleagris gallopavo	63.16	3.00e-14	72.00
IUUC-Mvi-060220	Microbotryum violaceum	42.11	4.00e-22	99.40
IUUC-Mmr-061159	Microcebus murinus	76.99	2.00e-83	302.00
IUUC-Mdo-061967	Monodelphis domestica	76.60	6.00e-77	281.00
IUUC-Mmu-063258	Mus musculus	72.26	7.00e-89	320.00
IUUC-Mpu-066389	Mustela putorius furo	74.70	3.00e-78	285.00
IUUC-Mlu-067999	Myotis lucifugus	71.38	3.00e-79	288.00
IUUC-Nfi-068390	Neosartorya fischeri	39.75	2.00e-29	122.00
IUUC-Ncr-068685	Neurospora crassa	38.15	4.00e-36	145.00
IUUC-Nle-069655	Nomascus leucogenys	73.13	3.00e-88	318.00
IUUC-Opr-070234	Ochotona princeps	92.86	3.00e-25	108.00
IUUC-Ocu-074831	Oryctolagus cuniculus	73.23	1.00e-82	299.00
IUUC-Ogu-078883	Oryza glumaepatula	38.55	5.00e-37	148.00
IUUC-Ome-081866	Oryza meridionalis	38.55	5.00e-37	148.00
IUUC-Ola-086540	Oryzias latipes	63.82	2.00e-67	249.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.67	3.00e-42	165.00
IUUC-Oga-088023	Otolemur garnettii	71.32	5.00e-82	298.00
IUUC-Oar-089964	Ovis aries	77.78	2.00e-80	292.00
IUUC-Ptr-091165	Pan troglodytes	75.20	2.00e-84	305.00
IUUC-Pan-092009	Papio anubis	72.32	1.00e-86	313.00
IUUC-Psi-093477	Pelodiscus sinensis	71.85	3.00e-76	278.00
IUUC-Ppa-095654	Physcomitrella patens	39.75	3.00e-41	162.00
IUUC-Pfo-097385	Poecilia formosa	62.34	7.00e-72	264.00
IUUC-Pab-097868	Pongo abelii	75.20	7.00e-84	303.00
IUUC-Pop-099642	Populus trichocarpa	38.62	2.00e-42	166.00
IUUC-Pca-100652	Procavia capensis	72.00	4.00e-58	218.00
IUUC-Ppe-101830	Prunus persica	38.40	5.00e-41	161.00
IUUC-Pva-102137	Pteropus vampyrus	77.59	3.00e-83	301.00
IUUC-Pte-104303	Pyrenophora teres	42.29	9.00e-26	110.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	41.90	1.00e-25	110.00
IUUC-Rno-104844	Rattus norvegicus	65.11	3.00e-110	391.00
IUUC-Sha-107073	Sarcophilus harrisii	77.02	5.00e-77	281.00
IUUC-Spo-108298	Schizosaccharomyces pombe	45.98	1.00e-41	163.00
IUUC-Sit-109813	Setaria italica	39.58	6.00e-41	161.00
IUUC-Sar-112925	Sorex araneus	66.67	4.00e-72	265.00
IUUC-Sre-114894	Sporisorium reilianum	54.84	7.00e-13	68.20
IUUC-Ssc-116329	Sus scrofa	73.78	2.00e-82	299.00
IUUC-Tru-118651	Takifugu rubripes	60.62	2.00e-75	275.00
IUUC-Tsy-118836	Tarsius syrichta	80.88	6.00e-44	171.00
IUUC-Tca-121661	Theobroma cacao	39.04	7.00e-41	160.00
IUUC-Tur-126610	Triticum urartu	38.84	1.00e-37	150.00
IUUC-Tbe-127493	Tupaia belangeri	59.78	3.00e-56	212.00
IUUC-Ttr-128464	Tursiops truncatus	74.53	3.00e-82	298.00
IUUC-Uma-129484	Ustilago maydis	50.00	6.00e-12	65.10
IUUC-Vda-129946	Verticillium dahliae	51.20	5.00e-20	92.00
IUUC-Vpa-130357	Vicugna pacos	68.44	6.00e-54	204.00
IUUC-Vvi-130842	Vitis vinifera	37.01	3.00e-42	165.00
IUUC-Xtr-132679	Xenopus tropicalis	68.99	4.00e-63	234.00
IUUC-Xma-133503	Xiphophorus maculatus	62.24	1.00e-73	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence