iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-081044

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN540834.1_FG003	KN540834.1_FGT003	KN540834.1_FGP003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-12	48.5	611	652

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle fk+g  ++ +pC H fha+C+  w       + + +CP Cr
   Q: 611  CAVCLEGFKEGdrVKKMPCSHDFHANCISDW------LRVSRLCPHCR 652
           ********55544999***************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MASSLLSSPK PSSFSSANPT STPRPRAQTL SPFRAAAPRF SYGLAAANPS ASRRCYHRAF 60
ARPVRASMAQ PRRPEYVPNR IDDPNYVRVF DTTLRDGEQS PGATMTSAEK LVVARQLARL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCCT CCCTCCTCTC CTCCCCAAAA CCCTCCTCCT TCTCCTCCGC AAACCCCACC 60
TCCACTCCAC GCCCACGCGC CCAAACCCTC TCCCCCTTCC GCGCCGCCGC CCCACGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006513	Arabidopsis lyrata	29.07	2.00e-17	82.00
IUUC-Oba-075036	Oryza barthii	83.82	3.00e-91	327.00
IUUC-Obr-076520	Oryza brachyantha	74.42	1.00e-34	138.00
IUUC-Ogl-077814	Oryza glaberrima	78.84	2.00e-91	327.00
IUUC-Ogu-078520	Oryza glumaepatula	72.95	3.00e-92	330.00
IUUC-Oin-080211	Oryza indica	77.59	3.00e-89	320.00
IUUC-Oni-082878	Oryza nivara	82.99	3.00e-89	322.00
IUUC-Opu-084081	Oryza punctata	77.39	1.00e-36	144.00
IUUC-Oru-084486	Oryza rufipogon	82.57	4.00e-88	318.00
IUUC-Olu-087781	Ostreococcus lucimarinus	38.83	3.00e-14	70.50
IUUC-Sit-109985	Setaria italica	59.21	5.00e-20	90.10
IUUC-Sly-111387	Solanum lycopersicum	40.28	2.00e-15	74.70
IUUC-Sbi-114592	Sorghum bicolor	60.53	2.00e-22	97.40
IUUC-Tca-121128	Theobroma cacao	47.95	1.00e-16	79.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence