iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111819

Ensembl Protein ID

Solyc03g096930.2.1

UniProt Accession

K4BJB1; K4BJB1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g096930.2	Solyc03g096930.2.1	Solyc03g096930.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-07	31.2	260	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +  + l CgH+fh +Cl  w        ++ +CP+Cr
   Q: 260  CIICREEMTT-AKKLICGHLFHVHCLRSW------LERQHTCPTCR 298
           ********99.89999*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVYLSTSKIS LVLLLNMGLV VMCILWQMTK KIFLGPLREA EVERLNEQSW RELMEILFAI 60
TIFRQDFSVT FLAMVTALLL IKGLHWLAQK RVEYIETTPT VTRLSHIRIV SFLGFLLFID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAGGATTCA GGATCTTCGC AACGATACAG AGACTTCACA GGTAAATTGA TCTATGTAGT 60
GTTTCGTTAC ACATTGTTTG TTGTTTTGCA TCTTCAATCA ATCAATCGAT CAGTCATATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0044322--C:endoplasmic reticulum quality control compartment
GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:1990381--F:ubiquitin-specific protease binding
GO:0051082--F:unfolded protein binding
GO:0008270--F:zinc ion binding
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	58.63	9.00e-114	402.00
IUUC-Aml-001539	Ailuropoda melanoleuca	44.48	4.00e-73	268.00
IUUC-Atr-002892	Amborella trichopoda	65.38	7.00e-172	596.00
IUUC-Apl-003404	Anas platyrhynchos	29.97	3.00e-36	145.00
IUUC-Aca-004799	Anolis carolinensis	44.48	1.00e-73	270.00
IUUC-Aly-006352	Arabidopsis lyrata	63.66	5.00e-159	553.00
IUUC-Ath-006773	Arabidopsis thaliana	63.45	4.00e-155	540.00
IUUC-Acl-008041	Aspergillus clavatus	33.51	3.00e-59	222.00
IUUC-Afl-008427	Aspergillus flavus	32.75	2.00e-54	206.00
IUUC-Afu-009023	Aspergillus fumigatus	32.20	9.00e-61	227.00
IUUC-Ani-009133	Aspergillus nidulans	32.89	1.00e-58	221.00
IUUC-Ang-009612	Aspergillus niger	38.84	9.00e-61	227.00
IUUC-Aor-010045	Aspergillus oryzae	32.98	4.00e-58	219.00
IUUC-Ate-010533	Aspergillus terreus	34.13	1.00e-56	213.00
IUUC-Ame-011083	Astyanax mexicanus	45.15	3.00e-74	271.00
IUUC-Bgr-012122	Blumeria graminis	37.37	4.00e-32	132.00
IUUC-Bta-013375	Bos taurus	44.82	5.00e-73	268.00
IUUC-Bdi-015070	Brachypodium distachyon	73.32	7.00e-144	503.00
IUUC-Bol-015674	Brassica oleracea	60.32	4.00e-155	540.00
IUUC-Bra-017516	Brassica rapa	70.50	3.00e-146	510.00
IUUC-Cel-018422	Caenorhabditis elegans	40.86	5.00e-67	248.00
IUUC-Cja-019779	Callithrix jacchus	43.14	9.00e-67	247.00
IUUC-Cfa-020189	Canis familiaris	44.82	5.00e-74	271.00
IUUC-Cpo-022209	Cavia porcellus	44.82	1.00e-73	270.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	50.50	4.00e-91	327.00
IUUC-Csa-023571	Chlorocebus sabaeus	44.82	2.00e-73	269.00
IUUC-Cho-024889	Choloepus hoffmanni	40.13	7.00e-62	231.00
IUUC-Cin-025215	Ciona intestinalis	27.27	3.00e-36	145.00
IUUC-Csv-026160	Ciona savignyi	37.90	4.00e-59	221.00
IUUC-Cne-027002	Cryptococcus neoformans	41.34	3.00e-68	252.00
IUUC-Cme-027285	Cyanidioschyzon merolae	40.55	3.00e-55	208.00
IUUC-Dre-027999	Danio rerio	43.89	3.00e-74	272.00
IUUC-Dno-029250	Dasypus novemcinctus	44.82	4.00e-73	268.00
IUUC-Dor-030718	Dipodomys ordii	45.74	7.00e-71	260.00
IUUC-Dse-031498	Dothistroma septosporum	40.99	1.00e-33	137.00
IUUC-Dme-031969	Drosophila melanogaster	43.09	2.00e-72	266.00
IUUC-Ete-032962	Echinops telfairi	29.65	2.00e-32	133.00
IUUC-Eca-033258	Equus caballus	44.82	3.00e-73	268.00
IUUC-Eeu-034515	Erinaceus europaeus	59.26	3.00e-15	75.90
IUUC-Fca-035980	Felis catus	44.82	5.00e-74	271.00
IUUC-Gmo-039288	Gadus morhua	44.11	3.00e-72	265.00
IUUC-Gga-040575	Gallus gallus	29.84	2.00e-38	153.00
IUUC-Gac-042347	Gasterosteus aculeatus	44.48	7.00e-76	277.00
IUUC-Gma-044123	Glycine max	71.71	2.00e-177	614.00
IUUC-Ggo-044858	Gorilla gorilla	44.82	3.00e-73	268.00
IUUC-Hsa-046412	Homo sapiens	44.82	4.00e-73	268.00
IUUC-Hvu-047279	Hordeum vulgare	71.97	6.00e-147	513.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	44.82	5.00e-73	268.00
IUUC-Kpa-049117	Komagataella pastoris	27.67	9.00e-30	124.00
IUUC-Lch-050491	Latimeria chalumnae	28.61	2.00e-35	143.00
IUUC-Lpe-051229	Leersia perrieri	60.00	3.00e-80	291.00
IUUC-Loc-052843	Lepisosteus oculatus	45.37	1.00e-50	192.00
IUUC-Lma-052997	Leptosphaeria maculans	33.51	6.00e-59	221.00
IUUC-Laf-053482	Loxodonta africana	44.82	3.00e-73	268.00
IUUC-Mcc-055075	Macaca mulatta	44.82	3.00e-73	268.00
IUUC-Meu-056683	Macropus eugenii	45.56	3.00e-61	228.00
IUUC-Mor-057082	Magnaporthe oryzae	33.06	1.00e-48	187.00
IUUC-Mpo-057573	Magnaporthe poae	32.68	2.00e-46	179.00
IUUC-Mtr-058601	Medicago truncatula	70.50	0.00e+00	632.00
IUUC-Mla-059168	Melampsora laricipopulina	39.70	6.00e-67	248.00
IUUC-Mga-059937	Meleagris gallopavo	29.77	6.00e-38	151.00
IUUC-Mvi-060515	Microbotryum violaceum	39.76	9.00e-59	221.00
IUUC-Mmr-060922	Microcebus murinus	44.82	2.00e-73	269.00
IUUC-Mdo-062491	Monodelphis domestica	44.82	1.00e-70	260.00
IUUC-Mmu-063770	Mus musculus	44.82	3.00e-73	268.00
IUUC-Mac-064789	Musa acuminata	60.31	2.00e-165	575.00
IUUC-Mpu-066107	Mustela putorius furo	44.82	6.00e-73	267.00
IUUC-Mlu-067918	Myotis lucifugus	44.82	3.00e-72	265.00
IUUC-Nfi-068389	Neosartorya fischeri	32.98	1.00e-59	223.00
IUUC-Ncr-068742	Neurospora crassa	32.64	4.00e-48	186.00
IUUC-Nle-069139	Nomascus leucogenys	44.82	4.00e-73	268.00
IUUC-Opr-070898	Ochotona princeps	46.94	7.00e-49	187.00
IUUC-Ont-071991	Oreochromis niloticus	44.82	1.00e-75	276.00
IUUC-Oan-073717	Ornithorhynchus anatinus	29.49	2.00e-35	143.00
IUUC-Ocu-074065	Oryctolagus cuniculus	44.82	1.00e-72	266.00
IUUC-Oba-075221	Oryza barthii	60.88	8.00e-150	522.00
IUUC-Obr-076914	Oryza brachyantha	71.47	4.00e-145	507.00
IUUC-Ogu-078124	Oryza glumaepatula	60.88	1.00e-149	522.00
IUUC-Oin-080013	Oryza indica	63.06	6.00e-139	486.00
IUUC-Olo-080247	Oryza longistaminata	57.91	4.00e-134	470.00
IUUC-Ome-081769	Oryza meridionalis	61.55	2.00e-152	531.00
IUUC-Oni-082946	Oryza nivara	60.88	7.00e-150	523.00
IUUC-Opu-083268	Oryza punctata	52.82	1.00e-114	406.00
IUUC-Oru-085114	Oryza rufipogon	60.88	1.00e-149	522.00
IUUC-Osa-085829	Oryza sativa	61.19	1.00e-149	522.00
IUUC-Ola-087449	Oryzias latipes	44.82	4.00e-75	275.00
IUUC-Olu-087894	Ostreococcus lucimarinus	50.80	1.00e-85	308.00
IUUC-Oga-089036	Otolemur garnettii	44.82	2.00e-73	269.00
IUUC-Oar-089715	Ovis aries	44.82	4.00e-73	268.00
IUUC-Ptr-091000	Pan troglodytes	44.82	6.00e-73	267.00
IUUC-Pan-092187	Papio anubis	44.82	2.00e-73	269.00
IUUC-Psi-093377	Pelodiscus sinensis	43.89	2.00e-69	256.00
IUUC-Pma-094759	Petromyzon marinus	50.38	7.00e-37	147.00
IUUC-Pno-094883	Phaeosphaeria nodorum	33.62	4.00e-57	215.00
IUUC-Ppa-095684	Physcomitrella patens	73.75	1.00e-119	422.00
IUUC-Pfo-096861	Poecilia formosa	45.48	1.00e-71	263.00
IUUC-Pab-098030	Pongo abelii	44.82	4.00e-73	268.00
IUUC-Pop-099245	Populus trichocarpa	67.19	0.00e+00	667.00
IUUC-Pca-100191	Procavia capensis	43.81	6.00e-69	254.00
IUUC-Ppe-101829	Prunus persica	68.94	0.00e+00	655.00
IUUC-Pva-102689	Pteropus vampyrus	44.48	7.00e-73	267.00
IUUC-Pgr-103286	Puccinia graminis	38.01	3.00e-67	249.00
IUUC-Ptt-103919	Puccinia triticina	37.25	1.00e-65	243.00
IUUC-Pte-104372	Pyrenophora teres	33.88	1.00e-60	226.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	33.79	1.00e-58	220.00
IUUC-Rno-105723	Rattus norvegicus	44.82	4.00e-73	268.00
IUUC-Sha-107300	Sarcophilus harrisii	45.21	5.00e-62	231.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	33.43	3.00e-39	155.00
IUUC-Spo-108308	Schizosaccharomyces pombe	32.94	1.00e-46	181.00
IUUC-Smo-109123	Selaginella moellendorffii	73.11	6.00e-128	449.00
IUUC-Sit-110276	Setaria italica	62.93	2.00e-153	535.00
IUUC-Sar-113397	Sorex araneus	34.55	2.00e-32	133.00
IUUC-Sbi-114192	Sorghum bicolor	61.86	2.00e-151	528.00
IUUC-Sre-115212	Sporisorium reilianum	38.57	9.00e-59	221.00
IUUC-Ssc-116323	Sus scrofa	44.48	6.00e-72	264.00
IUUC-Tgu-116717	Taeniopygia guttata	28.85	4.00e-36	145.00
IUUC-Tru-118045	Takifugu rubripes	46.15	3.00e-76	278.00
IUUC-Tsy-118823	Tarsius syrichta	38.54	2.00e-50	192.00
IUUC-Tni-120106	Tetraodon nigroviridis	46.80	5.00e-57	214.00
IUUC-Tca-121462	Theobroma cacao	69.88	0.00e+00	679.00
IUUC-Tre-122204	Trichoderma reesei	44.06	4.00e-33	135.00
IUUC-Tvi-122550	Trichoderma virens	43.36	4.00e-33	135.00
IUUC-Tae-124673	Triticum aestivum	61.29	1.00e-150	525.00
IUUC-Tur-126538	Triticum urartu	57.79	2.00e-113	402.00
IUUC-Tme-127197	Tuber melanosporum	41.84	7.00e-65	241.00
IUUC-Tbe-127385	Tupaia belangeri	40.13	1.00e-62	233.00
IUUC-Ttr-128795	Tursiops truncatus	44.82	4.00e-73	268.00
IUUC-Uma-129401	Ustilago maydis	37.46	5.00e-52	198.00
IUUC-Vda-129968	Verticillium dahliae	42.66	2.00e-30	126.00
IUUC-Vpa-130483	Vicugna pacos	28.47	9.00e-31	127.00
IUUC-Vvi-130944	Vitis vinifera	72.09	8.00e-177	612.00
IUUC-Xtr-131884	Xenopus tropicalis	43.81	3.00e-71	261.00
IUUC-Xma-133488	Xiphophorus maculatus	45.48	1.00e-71	263.00
IUUC-Yli-134552	Yarrowia lipolytica	31.23	3.00e-34	138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence