iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121618

Ensembl Protein ID

EOY13678

UniProt Accession

A0A061F9Y7; A0A061F9Y7_THECC

Genbank Protein ID

EOY13678.1

Protein Name

Ubiquitin-specific protease 15, putative isoform 1

Genbank Nucleotide ID

CM001885

Gene Name

TCM_032321

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_032321	EOY13678	EOY13678
TCM_032321	EOY13680	EOY13680
TCM_032321	EOY13679	EOY13679

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.50e-78	263.2	468	772

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflaflld 101
           Gl N gN+CY N+vLQcL+ +++l  +ll+ ++++++      +++ +l+++l++ +  l  ++ +  sp+++l+++++++ ++   +q+Da+Efl+ l+ 
   Q: 468  GLLNCGNSCYANAVLQCLTCTKPLSIYLLRrSHSRAC-----YGKDWCLMCELEQHVMLL-RESGGPLSPSSILTHIRSINCQMGDGSQEDAHEFLRLLVA 562
           9*****************************3333333.....57789**********877.9999************************************ PP
   S: 102  qleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeeleg 202
           ++++ +                ++l  e++ ++  +++++i+++F+g+l+s++kcl+c ++s+r+e+ +dl+l++ g  e    sl+d+L +ft++e l+g
   Q: 563  SMQSIC---------------LERLGGEHKVDPRLQETTFIQHTFGGHLRSKVKCLRCSHESERFENIMDLTLEIFGWVE----SLEDALTQFTTPEDLDG 644
           ******...............2345556788999*******************************************997....8**************** PP
   S: 203  enkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGsls...sGHYvayvk 300
           en+y c +c ++++a+k+l +++ P++L++ LkRf    ++++  kink+++fp++Ld+ p++t +  +   +  Y L+avvvH  +l+   sGHYv+yvk
   Q: 645  ENMYRCGRCASYVRARKQLCIHEAPNILTIVLKRF----QEGKYGKINKCITFPEMLDMVPYMTGTG-DI--PPLYMLYAVVVHLDTLNasfSGHYVSYVK 738
           ***********************************....446778********************44.33..9***********997664458******** PP
   S: 301  nekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           + +g+W+++dD++V++v++++v +   + aY+lfY+r
   Q: 739  DLQGNWFRIDDTEVHPVSMSQVMS---EGAYILFYMR 772
           ************************...********98 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MLEPREADIP ALFLVLVVLP LVAYFLLGKW SETSKKRERI SILAQLAAEE ALRAETMAAA 60
SVIPLVASSK NGLHVCARCF GPATTRCSRC KAVRYCSGRC QIIHWRQVHK QECLQLESAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTTAAAAA GTGGAAAGAG AAGTGTGAAG GCAAAGAAGT GTTGCATAGG AAGAGAGAGA 60
AAGATAGAAA AACTGTTGTC TTTATTCTTA CCATCTGAGG AATCAAAGAA TCTTTTTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000426	Aegilops tauschii	65.01	2.00e-144	505.00
IUUC-Atr-003062	Amborella trichopoda	58.29	2.00e-167	582.00
IUUC-Aly-006034	Arabidopsis lyrata	46.79	0.00e+00	824.00
IUUC-Ath-007599	Arabidopsis thaliana	46.33	0.00e+00	790.00
IUUC-Bdi-014717	Brachypodium distachyon	46.99	0.00e+00	712.00
IUUC-Bol-016470	Brassica oleracea	62.84	0.00e+00	707.00
IUUC-Bra-017772	Brassica rapa	67.62	0.00e+00	704.00
IUUC-Gma-043603	Glycine max	58.88	0.00e+00	1021.00
IUUC-Lpe-051615	Leersia perrieri	51.00	2.00e-165	575.00
IUUC-Mtr-058164	Medicago truncatula	57.87	0.00e+00	958.00
IUUC-Mac-064719	Musa acuminata	46.09	0.00e+00	691.00
IUUC-Oba-075960	Oryza barthii	45.15	0.00e+00	693.00
IUUC-Obr-076330	Oryza brachyantha	60.37	2.00e-174	605.00
IUUC-Ogl-077370	Oryza glaberrima	59.71	2.00e-172	599.00
IUUC-Ogu-078615	Oryza glumaepatula	45.15	0.00e+00	690.00
IUUC-Oin-079409	Oryza indica	59.27	6.00e-173	600.00
IUUC-Olo-080550	Oryza longistaminata	44.75	0.00e+00	635.00
IUUC-Ome-081508	Oryza meridionalis	44.64	0.00e+00	701.00
IUUC-Oni-082740	Oryza nivara	45.15	0.00e+00	694.00
IUUC-Opu-083669	Oryza punctata	43.18	2.00e-179	622.00
IUUC-Oru-084502	Oryza rufipogon	45.15	0.00e+00	694.00
IUUC-Osa-085475	Oryza sativa	59.71	2.00e-172	599.00
IUUC-Olu-087767	Ostreococcus lucimarinus	39.94	8.00e-62	229.00
IUUC-Pop-099882	Populus trichocarpa	68.59	0.00e+00	847.00
IUUC-Ppe-101942	Prunus persica	64.19	0.00e+00	1157.00
IUUC-Sit-109825	Setaria italica	46.43	0.00e+00	724.00
IUUC-Sly-111027	Solanum lycopersicum	64.54	0.00e+00	791.00
IUUC-Sbi-114225	Sorghum bicolor	46.87	0.00e+00	704.00
IUUC-Tae-123144	Triticum aestivum	67.53	9.00e-148	516.00
IUUC-Tur-126234	Triticum urartu	44.88	0.00e+00	645.00
IUUC-Vvi-131600	Vitis vinifera	63.86	0.00e+00	1170.00
IUUC-Zma-135823	Zea mays	46.40	0.00e+00	674.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence