iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131600

UUCD1 version

UUC-ViV-01133

Ensembl Protein ID

VIT_19s0140g00200.t01

UniProt Accession

F6HRG0; F6HRG0_VITVI

Genbank Protein ID

CCB57268.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596014

Gene Name

UBP15; VIT_19s0140g00200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_19s0140g00200	VIT_19s0140g00200.t01	VIT_19s0140g00200.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.60e-77	260.9	471	775

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           Gl N gN+CY N+vLQcL+ +++l  +ll+ ++++++       ++ +l+++l+k +  l  ++ +  sp+++l+++++++ ++   +
   Q: 471  GLLNCGNSCYANAVLQCLTCTKPLIIYLLQrSHSRTCCV-----TNWCLMCELEKHVMML-RESGGPLSPSRILSHMRSINCQIGDGS 552
           9*****************************555556655.....467**********766.9999*********************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpv 176
           q+Da+Efl+ l+ ++++ +                ++l  e+e +   +++++i+++F+g+l+s++kcl+c+ +s+r+e+ +dl+l++
   Q: 553  QEDAHEFLRLLVTSMQSIC---------------LEKLGGEREVDARLQETTFIQHTFGGRLRSKVKCLRCHLESERYENIMDLTLEI 625
           *******************...............23445556788999**************************************** PP
   S: 177  pgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspf 264
            g  e    sl+d+L +ft++e l+gen+y c++c+ +++a+k+l++++ P++L++ LkRf    ++++  kink+++fp++Ld+ pf
   Q: 626  FGWVE----SLEDALTQFTTPEDLDGENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRF----QEGRYGKINKCITFPDMLDMIPF 705
           **997....8***************************************************....458889***************** PP
   S: 265  ctspeekqkekkkYeLiavvvHsGsls...sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +t + +   ++  Y L+avvvH+ +l+   sGHYvayvk+ +g+W+++dD +V++v+ ++v +   + aY+lfY+r
   Q: 706  MTGTYD---VPPLYMLYAVVVHMDTLNasfSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMS---EGAYILFYMR 775
           ***553...49************97765568********************************...********98 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MLEPREADIP ALFLFLIVFP LVTYILLGKW SEVTKKKKRV SLLAQLAAEE AFKAEAMATA 60
SVMPLVSSSK SGNHECARCF GPATTRCSRC KSVRYCSGKC QIIHWRQVHK EECQQLETHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAGAGAG AGAAACGACT CAACGAGTCT TTGGGGTGGG AAGTGTTGGT TTTTGCCATC 60
AAGGGAATCA AGGAATCTGT TGCGGGATTT GGGAAGAAGA AGAAGGTGAA AGTGCTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vvi:100260067

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000426	Aegilops tauschii	66.39	2.00e-146	512.00
IUUC-Atr-003062	Amborella trichopoda	56.03	7.00e-173	600.00
IUUC-Aly-006034	Arabidopsis lyrata	51.03	0.00e+00	758.00
IUUC-Ath-007599	Arabidopsis thaliana	49.72	0.00e+00	760.00
IUUC-Bdi-014717	Brachypodium distachyon	46.21	0.00e+00	719.00
IUUC-Bol-015616	Brassica oleracea	62.76	0.00e+00	686.00
IUUC-Bra-017955	Brassica rapa	50.28	0.00e+00	747.00
IUUC-Gma-043603	Glycine max	57.21	0.00e+00	979.00
IUUC-Lpe-051615	Leersia perrieri	58.38	6.00e-171	593.00
IUUC-Mtr-058164	Medicago truncatula	56.03	0.00e+00	885.00
IUUC-Mac-065536	Musa acuminata	63.60	1.00e-167	582.00
IUUC-Oba-075960	Oryza barthii	51.83	6.00e-176	610.00
IUUC-Obr-076330	Oryza brachyantha	54.90	1.00e-179	622.00
IUUC-Ogl-077370	Oryza glaberrima	56.20	0.00e+00	626.00
IUUC-Ogu-078615	Oryza glumaepatula	51.83	4.00e-176	611.00
IUUC-Oin-079409	Oryza indica	57.17	0.00e+00	631.00
IUUC-Olo-080550	Oryza longistaminata	45.04	0.00e+00	651.00
IUUC-Ome-081508	Oryza meridionalis	52.37	8.00e-176	610.00
IUUC-Oni-082740	Oryza nivara	52.66	1.00e-176	613.00
IUUC-Opu-083669	Oryza punctata	51.22	7.00e-154	537.00
IUUC-Oru-084502	Oryza rufipogon	52.66	1.00e-176	613.00
IUUC-Osa-085475	Oryza sativa	57.17	0.00e+00	629.00
IUUC-Olu-087767	Ostreococcus lucimarinus	40.19	9.00e-63	232.00
IUUC-Pop-099882	Populus trichocarpa	66.40	0.00e+00	801.00
IUUC-Ppe-101942	Prunus persica	61.92	0.00e+00	1092.00
IUUC-Sit-109825	Setaria italica	46.56	0.00e+00	724.00
IUUC-Sly-111027	Solanum lycopersicum	54.22	0.00e+00	904.00
IUUC-Sbi-114225	Sorghum bicolor	45.38	0.00e+00	733.00
IUUC-Tca-121618	Theobroma cacao	63.96	0.00e+00	1155.00
IUUC-Tae-123144	Triticum aestivum	45.71	4.00e-154	537.00
IUUC-Tur-126234	Triticum urartu	57.12	2.00e-172	599.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence