iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107858

Ensembl Protein ID

EEB07244

UniProt Accession

B6K263; B6K263_SCHJY

Genbank Protein ID

EEB07244.1

Protein Name

WD repeat protein Swd3

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_02329

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_02329	EEB07244	EEB07244

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-44	145.0	99	138
UBD/Beta-Prp	1.50e-66	222.5	18	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gHt+ v c++f +d +l+vsGs+D t+k+W++ +g +l++
   Q: 99   GHTNYVLCVDFnHDgNLIVSGSWDETVKIWNVQEGSCLRT 138
           8***********888**********************985 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvs 111
           +v++  + sp+k++lat+s dg ik+w +++ +l  +l+gh+a+v++v +s d+k+lv++s+D+ti+vw++++gkc ++l+gh+++vl+++f+ +g+ +vs
   Q: 18   QVLYLSTASPNKRWLATASSDGVIKIWYTRSFSLECTLYGHTAGVSQVAWSCDSKLLVSASDDKTIRVWNVENGKCERVLRGHTNYVLCVDFNHDGNLIVS 118
           46676777********************************************************************************************* PP
   S: 112  GshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtg 212
           Gs+d+t+++w++++g+cl+ tl  h++ v+ v+++ d+ ll+++s+D++ r+Wd++tg++l+tl +  + +    +f++n+++l+   l++ v+lwd++tg
   Q: 119  GSWDETVKIWNVQEGSCLR-TLPAHSEPVTAVSFSHDSTLLATASYDGMARIWDVPTGQCLKTLVEPVNVPLAYATFTPNSRYLLVSNLNSEVRLWDYRTG 218
           *******************.********************************************88899999***************************** PP
   S: 213  ecvrtlnght 222
           + vr ++   
   Q: 219  HLVRLYKTFP 228
           *988776544 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MLPPLLLFME KGHDEYHQVL YLSTASPNKR WLATASSDGV IKIWYTRSFS LECTLYGHTA 60
GVSQVAWSCD SKLLVSASDD KTIRVWNVEN GKCERVLRGH TNYVLCVDFN HDGNLIVSGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTCCTC CTCTTCTTTT GTTCATGGAA AAAGGCCACG ACGAGTACCA CCAGGTCCTC 60
TATTTGTCGA GTATTGTAAT CTTATCGGTC ACGAAAAAGC TGTAACAAGT TTAGCGGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0048188--C:Set1C/COMPASS complex
GO:0051568--P:histone H3-K4 methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000502	Aegilops tauschii	37.18	1.00e-44	171.00
IUUC-Aml-002420	Ailuropoda melanoleuca	51.17	4.00e-69	252.00
IUUC-Atr-002439	Amborella trichopoda	45.07	3.00e-61	226.00
IUUC-Apl-003436	Anas platyrhynchos	54.59	9.00e-68	248.00
IUUC-Aca-004259	Anolis carolinensis	51.17	4.00e-69	252.00
IUUC-Aly-005723	Arabidopsis lyrata	44.75	5.00e-56	209.00
IUUC-Ath-007308	Arabidopsis thaliana	43.58	5.00e-56	209.00
IUUC-Ago-007915	Ashbya gossypii	29.93	1.00e-34	138.00
IUUC-Acl-008045	Aspergillus clavatus	44.39	2.00e-53	201.00
IUUC-Afl-008596	Aspergillus flavus	43.93	2.00e-53	201.00
IUUC-Afu-009074	Aspergillus fumigatus	45.33	6.00e-54	202.00
IUUC-Ani-009318	Aspergillus nidulans	43.46	3.00e-52	197.00
IUUC-Ang-009775	Aspergillus niger	44.64	3.00e-54	204.00
IUUC-Aor-010222	Aspergillus oryzae	43.93	2.00e-53	201.00
IUUC-Ate-010583	Aspergillus terreus	42.67	2.00e-53	201.00
IUUC-Ame-011349	Astyanax mexicanus	50.70	3.00e-68	249.00
IUUC-Bgr-011968	Blumeria graminis	45.49	2.00e-54	204.00
IUUC-Bta-013016	Bos taurus	51.17	6.00e-69	252.00
IUUC-Bci-013948	Botrytis cinerea	46.70	5.00e-54	202.00
IUUC-Bdi-014263	Brachypodium distachyon	44.44	4.00e-59	219.00
IUUC-Bol-015900	Brassica oleracea	43.89	5.00e-56	208.00
IUUC-Bra-017143	Brassica rapa	43.89	1.00e-56	211.00
IUUC-Cel-018355	Caenorhabditis elegans	47.42	1.00e-62	231.00
IUUC-Cja-019936	Callithrix jacchus	51.17	4.00e-69	252.00
IUUC-Cfa-020596	Canis familiaris	51.17	4.00e-69	252.00
IUUC-Cpo-021318	Cavia porcellus	51.17	4.00e-69	252.00
IUUC-Cre-022935	Chlamydomonas reinhardtii	44.50	9.00e-55	205.00
IUUC-Csa-023053	Chlorocebus sabaeus	51.17	4.00e-69	252.00
IUUC-Cho-024642	Choloepus hoffmanni	49.77	3.00e-59	219.00
IUUC-Cin-025495	Ciona intestinalis	46.58	1.00e-66	244.00
IUUC-Csv-025988	Ciona savignyi	49.77	3.00e-67	246.00
IUUC-Cne-027025	Cryptococcus neoformans	29.52	5.00e-33	133.00
IUUC-Cme-027119	Cyanidioschyzon merolae	40.50	4.00e-50	189.00
IUUC-Dre-027521	Danio rerio	50.70	2.00e-68	250.00
IUUC-Dno-029739	Dasypus novemcinctus	51.17	7.00e-69	251.00
IUUC-Dor-030966	Dipodomys ordii	51.17	6.00e-69	251.00
IUUC-Dse-031189	Dothistroma septosporum	36.13	2.00e-60	224.00
IUUC-Dme-031613	Drosophila melanogaster	47.64	3.00e-67	246.00
IUUC-Ete-033098	Echinops telfairi	50.23	4.00e-63	233.00
IUUC-Eca-033790	Equus caballus	51.17	4.00e-69	252.00
IUUC-Eeu-034805	Erinaceus europaeus	45.06	7.00e-56	208.00
IUUC-Fca-035901	Felis catus	51.17	4.00e-69	252.00
IUUC-Fal-037413	Ficedula albicollis	51.17	4.00e-69	252.00
IUUC-Fox-038019	Fusarium oxysporum	49.66	1.00e-37	147.00
IUUC-Gmo-039131	Gadus morhua	51.17	4.00e-69	252.00
IUUC-Ggr-040071	Gaeumannomyces graminis	38.58	2.00e-47	181.00
IUUC-Gga-040789	Gallus gallus	51.17	4.00e-69	252.00
IUUC-Gac-042634	Gasterosteus aculeatus	50.23	2.00e-67	246.00
IUUC-Gma-043692	Glycine max	46.40	1.00e-59	221.00
IUUC-Ggo-044443	Gorilla gorilla	51.17	4.00e-69	252.00
IUUC-Hsa-046290	Homo sapiens	51.17	4.00e-69	252.00
IUUC-Hvu-047077	Hordeum vulgare	47.31	3.00e-53	199.00
IUUC-Itr-048954	Ictidomys tridecemlineatus	51.17	4.00e-69	252.00
IUUC-Kpa-049404	Komagataella pastoris	43.87	4.00e-52	196.00
IUUC-Lch-049539	Latimeria chalumnae	51.17	4.00e-69	252.00
IUUC-Lpe-051082	Leersia perrieri	44.65	5.00e-60	222.00
IUUC-Loc-051743	Lepisosteus oculatus	50.70	3.00e-68	249.00
IUUC-Lma-053188	Leptosphaeria maculans	36.53	2.00e-53	201.00
IUUC-Laf-054432	Loxodonta africana	47.60	8.00e-66	241.00
IUUC-Mcc-055603	Macaca mulatta	51.17	4.00e-69	252.00
IUUC-Meu-056440	Macropus eugenii	50.93	3.00e-56	209.00
IUUC-Mor-056965	Magnaporthe oryzae	40.98	9.00e-48	182.00
IUUC-Mpo-057333	Magnaporthe poae	38.40	1.00e-47	182.00
IUUC-Mtr-057951	Medicago truncatula	46.40	4.00e-59	219.00
IUUC-Mla-058896	Melampsora laricipopulina	42.61	1.00e-50	191.00
IUUC-Mga-060046	Meleagris gallopavo	51.17	4.00e-69	252.00
IUUC-Mvi-060453	Microbotryum violaceum	33.06	9.00e-54	202.00
IUUC-Mmr-061020	Microcebus murinus	50.93	2.00e-62	230.00
IUUC-Mdo-062204	Monodelphis domestica	48.50	7.00e-69	251.00
IUUC-Mmu-063917	Mus musculus	51.17	4.00e-69	252.00
IUUC-Mac-065310	Musa acuminata	42.25	3.00e-56	210.00
IUUC-Mpu-066072	Mustela putorius furo	51.17	4.00e-69	252.00
IUUC-Mlu-068209	Myotis lucifugus	51.17	4.00e-69	252.00
IUUC-Nfi-068538	Neosartorya fischeri	44.86	1.00e-53	202.00
IUUC-Ncr-068651	Neurospora crassa	40.60	1.00e-48	185.00
IUUC-Nle-069383	Nomascus leucogenys	50.70	3.00e-59	219.00
IUUC-Opr-070937	Ochotona princeps	51.64	1.00e-58	218.00
IUUC-Ont-071458	Oreochromis niloticus	50.70	1.00e-68	251.00
IUUC-Oan-073597	Ornithorhynchus anatinus	51.17	5.00e-69	252.00
IUUC-Oba-075292	Oryza barthii	40.64	4.00e-48	182.00
IUUC-Obr-076723	Oryza brachyantha	38.79	8.00e-46	175.00
IUUC-Ogl-077251	Oryza glaberrima	42.60	4.00e-56	209.00
IUUC-Ogu-078882	Oryza glumaepatula	45.36	8.00e-51	192.00
IUUC-Oin-079601	Oryza indica	37.11	4.00e-51	192.00
IUUC-Olo-080976	Oryza longistaminata	44.92	3.00e-53	199.00
IUUC-Ome-081430	Oryza meridionalis	42.99	3.00e-56	209.00
IUUC-Oni-082182	Oryza nivara	44.67	2.00e-50	191.00
IUUC-Opu-083880	Oryza punctata	42.99	2.00e-56	210.00
IUUC-Oru-084935	Oryza rufipogon	38.24	3.00e-47	180.00
IUUC-Osa-085706	Oryza sativa	42.60	4.00e-56	209.00
IUUC-Ola-087134	Oryzias latipes	50.70	1.00e-68	251.00
IUUC-Olu-087660	Ostreococcus lucimarinus	39.07	9.00e-34	133.00
IUUC-Oga-088672	Otolemur garnettii	51.17	4.00e-69	252.00
IUUC-Oar-089860	Ovis aries	47.64	2.00e-58	216.00
IUUC-Ptr-091513	Pan troglodytes	51.17	4.00e-69	252.00
IUUC-Pan-092046	Papio anubis	51.17	4.00e-69	252.00
IUUC-Psi-093192	Pelodiscus sinensis	51.17	4.00e-69	252.00
IUUC-Pno-094881	Phaeosphaeria nodorum	42.26	1.00e-53	201.00
IUUC-Ppa-095367	Physcomitrella patens	46.95	2.00e-65	240.00
IUUC-Pfo-097434	Poecilia formosa	50.70	1.00e-68	250.00
IUUC-Pab-098758	Pongo abelii	50.23	2.00e-58	217.00
IUUC-Pop-100040	Populus trichocarpa	44.91	4.00e-57	212.00
IUUC-Pca-100281	Procavia capensis	57.45	4.00e-48	182.00
IUUC-Ppe-101341	Prunus persica	48.11	2.00e-56	210.00
IUUC-Pva-103020	Pteropus vampyrus	51.17	4.00e-69	252.00
IUUC-Pgr-103589	Puccinia graminis	38.34	3.00e-44	170.00
IUUC-Ptt-103745	Puccinia triticina	35.44	5.00e-27	112.00
IUUC-Pte-104153	Pyrenophora teres	33.33	1.00e-54	205.00
IUUC-Pyt-104712	Pyrenophora triticirepentis	41.60	6.00e-53	199.00
IUUC-Rno-105858	Rattus norvegicus	51.17	4.00e-69	252.00
IUUC-Sce-106243	Saccharomyces cerevisiae	34.86	1.00e-33	134.00
IUUC-Sha-107101	Sarcophilus harrisii	51.17	4.00e-69	252.00
IUUC-Spo-108117	Schizosaccharomyces pombe	52.52	9.00e-95	338.00
IUUC-Smo-109155	Selaginella moellendorffii	44.30	1.00e-62	231.00
IUUC-Sit-110688	Setaria italica	43.52	3.00e-58	216.00
IUUC-Sly-110891	Solanum lycopersicum	43.22	1.00e-59	221.00
IUUC-Stu-112365	Solanum tuberosum	43.22	1.00e-59	221.00
IUUC-Sbi-114284	Sorghum bicolor	43.52	6.00e-58	215.00
IUUC-Sre-115180	Sporisorium reilianum	43.44	3.00e-43	166.00
IUUC-Ssc-116204	Sus scrofa	51.17	5.00e-69	252.00
IUUC-Tgu-117172	Taeniopygia guttata	51.17	4.00e-69	252.00
IUUC-Tru-118320	Takifugu rubripes	50.70	7.00e-69	251.00
IUUC-Tni-120660	Tetraodon nigroviridis	55.62	2.00e-58	216.00
IUUC-Tca-121051	Theobroma cacao	45.21	1.00e-57	214.00
IUUC-Tre-122237	Trichoderma reesei	42.42	4.00e-53	199.00
IUUC-Tvi-122635	Trichoderma virens	42.67	4.00e-53	199.00
IUUC-Tae-125819	Triticum aestivum	44.91	3.00e-59	219.00
IUUC-Tur-126219	Triticum urartu	40.66	9.00e-43	164.00
IUUC-Tme-127061	Tuber melanosporum	48.13	8.00e-62	228.00
IUUC-Tbe-127488	Tupaia belangeri	48.50	4.00e-60	222.00
IUUC-Ttr-129309	Tursiops truncatus	53.27	8.00e-68	248.00
IUUC-Uma-129585	Ustilago maydis	33.43	1.00e-45	174.00
IUUC-Vda-129907	Verticillium dahliae	43.04	3.00e-52	197.00
IUUC-Vpa-130384	Vicugna pacos	48.07	3.00e-58	216.00
IUUC-Vvi-131269	Vitis vinifera	45.81	1.00e-57	214.00
IUUC-Xtr-131945	Xenopus tropicalis	51.17	4.00e-69	252.00
IUUC-Xma-132997	Xiphophorus maculatus	50.70	1.00e-68	250.00
IUUC-Yli-134418	Yarrowia lipolytica	49.07	2.00e-64	237.00
IUUC-Zma-135765	Zea mays	43.06	2.00e-57	214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence