iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100092

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_880096; POPTR_0010s06070g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s06070	POPTR_0010s06070.1	POPTR_0010s06070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-23	82.0	209	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H+d vt+la   +++l+ s s+D+++k+W+ ++  +l
   Q: 209  HADAVTGLAVndNNGLIYSVSWDKSLKIWRASDLQCL 245
           9*********8544****************8877776 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRVRSWLAST CATNSTLDST FSFSNNQSQP PKHLASDTSS SSNSTPSTTS TATSSVSLQS 60
NLSLQTLPSV PSLQKITPET LNVSSLCINS LKPQQNHLPI TCLVVQDNLL YAASSHEINV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAGTCC GATCATGGCT AGCCTCCACC TGCGCCACCA ATTCCACTCT AGACTCCACT 60
TTCTCCTTCT CAAATAACCA ATCACAGCCT CCGAAGCATC TTGCTTCCGA CACAAGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

pop:POPTR_0010s06070g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	52.37	7.00e-98	350.00
IUUC-Aly-006280	Arabidopsis lyrata	68.75	9.00e-136	476.00
IUUC-Ath-006951	Arabidopsis thaliana	68.47	1.00e-135	475.00
IUUC-Bdi-015036	Brachypodium distachyon	45.92	8.00e-51	194.00
IUUC-Bol-015247	Brassica oleracea	68.93	7.00e-137	479.00
IUUC-Bra-017464	Brassica rapa	68.36	6.00e-136	476.00
IUUC-Gma-043162	Glycine max	66.38	9.00e-133	466.00
IUUC-Mtr-057789	Medicago truncatula	67.47	2.00e-137	481.00
IUUC-Mac-065257	Musa acuminata	54.50	2.00e-97	348.00
IUUC-Olu-087837	Ostreococcus lucimarinus	29.26	3.00e-26	111.00
IUUC-Ppe-101598	Prunus persica	72.70	3.00e-138	484.00
IUUC-Sly-111566	Solanum lycopersicum	66.29	2.00e-133	468.00
IUUC-Stu-112893	Solanum tuberosum	64.89	2.00e-130	457.00
IUUC-Tca-121847	Theobroma cacao	72.65	4.00e-143	500.00
IUUC-Tae-123809	Triticum aestivum	45.59	7.00e-60	224.00
IUUC-Vvi-130905	Vitis vinifera	68.16	4.00e-140	490.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence