iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099478

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_770185; POPTR_0010s19330g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s19330	POPTR_0010s19330.1	POPTR_0010s19330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-32	111.9	282	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIsl+lM+dPv+++sG+tydr+sI++w++sg++tcP+ +q+l +  l+Pn++l++++++wc++n++
   Q: 282  IPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINSGHQTCPKSGQRLIHMALIPNYALKSMVHQWCQDNNV 354
           8********************************************************************9975 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNVALPPIMI SSVFLPTGSL VESLIHISNE VASVEKLPFV QFRNISTMIR RIKLLSSLFE 60
DIRETNSPLP PSSILCLTEL FSVIQRVKLL IQGCKDGSSL WGLIQTQFLS NQFHVLVKEM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCATATAG GGTAAGAGGT CATGAATGTA GCCCTCCCTC CTATCATGAT CTCCTCAGTT 60
TTTTTGCCAA CTGGGTCTCT GGTGGAATCA TTGATTCATA TATCCAATGA AGTTGCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0010s19330g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002723	Amborella trichopoda	50.90	5.00e-159	554.00
IUUC-Mtr-058278	Medicago truncatula	68.39	0.00e+00	848.00
IUUC-Olu-087884	Ostreococcus lucimarinus	52.24	2.00e-23	99.40
IUUC-Ppe-101201	Prunus persica	75.36	0.00e+00	934.00
IUUC-Tca-121845	Theobroma cacao	76.63	0.00e+00	1010.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence