iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oin-079661

UUCD1 version

UUC-OrI-01209

Ensembl Protein ID

BGIOSGA010086-PA

UniProt Accession

B8AP31; E0AEC9; GBB_ORYSI

Genbank Protein ID

ADL27745.1; EEC75892.1

Protein Name

Guanine nucleotide-binding protein subunit beta; WD40 repeat-containing protein 80

Genbank Nucleotide ID

HM768320; CM000128

Gene Name

RGBB; OsI_12941

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA010086	BGIOSGA010086-TA	BGIOSGA010086-PA

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-42	141.1	247	285
UBD/Beta-Prp	3.90e-52	178.3	53	289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++++++++f +d  ++ +GsdDgt++++D+rtg++l+
   Q: 247  GHEGDINSVKFfPDgQRFGTGSDDGTCRLFDVRTGHQLQ 285
           8*********99999********************9987 PP

UBD/Beta-Prp

   S: 39   vttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
            t+  + r+l+gh+++v+++++ p+++++v++s+D+ + vw+  t++ +h++k h   v++++f p+g++++ G+ d+   +++l+++     
   Q: 53   PTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMTCAFAPNGQSVACGGLDSACSIFNLNSQADRDG 145
           4566779****************************************************************************9999888766 PP
   S: 132  ......tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtl.....tgghtdsvyslsfdsng.kelvsgsldgtvklwdlq. 210
                 +l+gh+g v++ ++ pd+   l+++s D+t+ lWd+ tg+ +  +     +g ht +v sls++s+  + +vsgs+d tv+lwd++ 
   Q: 146  nipvsrILTGHKGYVSSCQYVPDQeTRLITSSGDQTCVLWDVTTGQRISIFggefpSG-HTADVLSLSINSSIsNMFVSGSCDATVRLWDIRi 237
           999999*************************************************776.*********7765449****************** PP
   S: 211  tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
           +++ vrt++gh+  ++sv+f+p+++r+ +gs+Dg+ r++d+r+g  l+++++
   Q: 238  ASRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDVRTGHQLQVYSR 289
           9999****************************************99998876 PP

Organism

Oryza indica

Functional Description
(View)

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Protein Sequence
(Fasta)

MASVAELKEK HAAATASVNS LRERLRQRRQ MLLDTDVERY SRTQGRTPVS FNPTDLVCCR 60
TLQGHSGKVY SLDWTPEKNW IVSASQDGRL IVWNALTSQK THAIKLHCPW VMTCAFAPNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCCG TGGCGGAGCT CAAGGAGAAG CACGCGGCGG CCACGGCGTC GGTGAACTCC 60
CTGCGGGAGC GGCTCCGTCA GAGGCGGCAG ATGCTGCTCG ACACCGACGG TGAGGTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0807--Transducer
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane
GO:0004871--F:signal transducer activity
GO:0007186--P:G-protein coupled receptor signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	93.43	6.00e-176	608.00
IUUC-Aml-002370	Ailuropoda melanoleuca	48.40	5.00e-84	303.00
IUUC-Atr-002610	Amborella trichopoda	82.01	5.00e-179	619.00
IUUC-Apl-004079	Anas platyrhynchos	48.06	2.00e-85	308.00
IUUC-Aca-004539	Anolis carolinensis	44.20	3.00e-84	304.00
IUUC-Aly-006025	Arabidopsis lyrata	76.78	3.00e-163	566.00
IUUC-Ath-006617	Arabidopsis thaliana	77.04	1.00e-162	565.00
IUUC-Ago-007831	Ashbya gossypii	33.33	4.00e-46	178.00
IUUC-Acl-008154	Aspergillus clavatus	47.79	1.00e-89	322.00
IUUC-Afl-008568	Aspergillus flavus	48.11	3.00e-92	331.00
IUUC-Afu-008789	Aspergillus fumigatus	52.94	1.00e-89	322.00
IUUC-Ani-009213	Aspergillus nidulans	52.87	3.00e-91	327.00
IUUC-Ang-009836	Aspergillus niger	47.84	3.00e-92	330.00
IUUC-Aor-010165	Aspergillus oryzae	48.11	3.00e-92	331.00
IUUC-Ate-010520	Aspergillus terreus	44.18	1.00e-70	258.00
IUUC-Ame-011092	Astyanax mexicanus	50.96	4.00e-87	313.00
IUUC-Bgr-012079	Blumeria graminis	52.61	2.00e-86	311.00
IUUC-Bta-012810	Bos taurus	48.40	6.00e-84	303.00
IUUC-Bci-013621	Botrytis cinerea	52.40	7.00e-89	319.00
IUUC-Bdi-014785	Brachypodium distachyon	94.74	0.00e+00	704.00
IUUC-Bol-015657	Brassica oleracea	75.99	1.00e-163	568.00
IUUC-Bra-017618	Brassica rapa	75.73	1.00e-163	568.00
IUUC-Cel-018704	Caenorhabditis elegans	45.55	5.00e-87	313.00
IUUC-Cja-019894	Callithrix jacchus	48.72	4.00e-84	303.00
IUUC-Cfa-020140	Canis familiaris	48.08	6.00e-84	303.00
IUUC-Cpo-021908	Cavia porcellus	48.08	6.00e-84	303.00
IUUC-Csa-023321	Chlorocebus sabaeus	43.67	2.00e-84	305.00
IUUC-Cho-024766	Choloepus hoffmanni	50.00	3.00e-82	297.00
IUUC-Cin-025309	Ciona intestinalis	47.77	2.00e-85	308.00
IUUC-Csv-026258	Ciona savignyi	49.68	5.00e-85	306.00
IUUC-Cgl-026673	Colletotrichum gloeosporioides	50.58	6.00e-91	326.00
IUUC-Cne-026811	Cryptococcus neoformans	50.16	4.00e-85	307.00
IUUC-Dre-027412	Danio rerio	50.64	3.00e-86	311.00
IUUC-Dno-029783	Dasypus novemcinctus	49.04	2.00e-84	305.00
IUUC-Dor-030322	Dipodomys ordii	44.55	5.00e-71	260.00
IUUC-Dse-031388	Dothistroma septosporum	52.87	6.00e-90	323.00
IUUC-Dme-031748	Drosophila melanogaster	48.37	4.00e-84	303.00
IUUC-Ete-032710	Echinops telfairi	49.04	1.00e-80	292.00
IUUC-Eca-034169	Equus caballus	49.04	2.00e-84	305.00
IUUC-Eeu-034631	Erinaceus europaeus	45.51	8.00e-74	269.00
IUUC-Fca-035392	Felis catus	48.08	6.00e-84	303.00
IUUC-Fal-036902	Ficedula albicollis	44.20	2.00e-84	305.00
IUUC-Fox-037946	Fusarium oxysporum	51.21	2.00e-91	328.00
IUUC-Fso-038136	Fusarium solani	51.21	2.00e-91	328.00
IUUC-Gmo-039709	Gadus morhua	50.32	2.00e-86	311.00
IUUC-Ggr-039969	Gaeumannomyces graminis	50.29	5.00e-90	323.00
IUUC-Gga-040655	Gallus gallus	49.68	3.00e-85	307.00
IUUC-Gac-041386	Gasterosteus aculeatus	50.64	5.00e-87	313.00
IUUC-Gma-044308	Glycine max	79.84	4.00e-173	599.00
IUUC-Ggo-045346	Gorilla gorilla	43.67	2.00e-84	305.00
IUUC-Hsa-046203	Homo sapiens	43.67	2.00e-84	305.00
IUUC-Hvu-047596	Hordeum vulgare	94.74	0.00e+00	700.00
IUUC-Itr-048501	Ictidomys tridecemlineatus	49.36	3.00e-84	304.00
IUUC-Kpa-049192	Komagataella pastoris	34.91	1.00e-46	179.00
IUUC-Lch-049422	Latimeria chalumnae	50.96	3.00e-80	290.00
IUUC-Lpe-051040	Leersia perrieri	97.63	0.00e+00	721.00
IUUC-Loc-052939	Lepisosteus oculatus	50.96	6.00e-87	313.00
IUUC-Lma-052985	Leptosphaeria maculans	51.91	2.00e-87	315.00
IUUC-Laf-053616	Loxodonta africana	48.08	1.00e-83	302.00
IUUC-Mcc-055798	Macaca mulatta	43.67	2.00e-84	305.00
IUUC-Meu-056902	Macropus eugenii	50.32	8.00e-83	299.00
IUUC-Mor-057188	Magnaporthe oryzae	49.71	3.00e-89	321.00
IUUC-Mpo-057544	Magnaporthe poae	50.00	5.00e-90	323.00
IUUC-Mtr-058752	Medicago truncatula	80.16	9.00e-176	608.00
IUUC-Mla-059086	Melampsora laricipopulina	48.24	4.00e-89	320.00
IUUC-Mga-059516	Meleagris gallopavo	44.20	2.00e-85	308.00
IUUC-Mvi-060482	Microbotryum violaceum	48.25	2.00e-91	328.00
IUUC-Mmr-061701	Microcebus murinus	48.72	2.00e-84	305.00
IUUC-Mdo-062734	Monodelphis domestica	50.32	8.00e-83	299.00
IUUC-Mmu-063132	Mus musculus	49.36	2.00e-85	308.00
IUUC-Mac-064523	Musa acuminata	86.24	0.00e+00	632.00
IUUC-Mpu-066365	Mustela putorius furo	48.40	3.00e-84	304.00
IUUC-Mlu-067628	Myotis lucifugus	43.94	2.00e-85	308.00
IUUC-Nfi-068332	Neosartorya fischeri	47.79	2.00e-89	322.00
IUUC-Ncr-068650	Neurospora crassa	52.26	7.00e-88	316.00
IUUC-Nle-069015	Nomascus leucogenys	48.72	1.00e-82	299.00
IUUC-Opr-070261	Ochotona princeps	48.72	4.00e-84	303.00
IUUC-Ont-071775	Oreochromis niloticus	50.96	8.00e-87	312.00
IUUC-Oan-072780	Ornithorhynchus anatinus	50.00	6.00e-80	290.00
IUUC-Ocu-074255	Oryctolagus cuniculus	48.72	2.00e-84	304.00
IUUC-Oba-075818	Oryza barthii	95.93	0.00e+00	718.00
IUUC-Obr-076229	Oryza brachyantha	98.27	0.00e+00	690.00
IUUC-Ogl-077730	Oryza glaberrima	99.21	0.00e+00	729.00
IUUC-Ogu-078583	Oryza glumaepatula	98.88	7.00e-153	531.00
IUUC-Olo-080225	Oryza longistaminata	98.88	7.00e-153	531.00
IUUC-Oni-082161	Oryza nivara	98.95	0.00e+00	728.00
IUUC-Opu-084072	Oryza punctata	98.42	0.00e+00	725.00
IUUC-Oru-084316	Oryza rufipogon	99.74	0.00e+00	728.00
IUUC-Osa-085380	Oryza sativa	99.74	0.00e+00	728.00
IUUC-Ola-087490	Oryzias latipes	50.64	3.00e-86	310.00
IUUC-Oga-088685	Otolemur garnettii	48.72	2.00e-84	304.00
IUUC-Oar-089373	Ovis aries	48.40	6.00e-84	303.00
IUUC-Ptr-091444	Pan troglodytes	50.32	1.00e-82	298.00
IUUC-Pan-092347	Papio anubis	49.04	2.00e-84	305.00
IUUC-Psi-092965	Pelodiscus sinensis	47.76	4.00e-85	306.00
IUUC-Pma-094748	Petromyzon marinus	50.00	2.00e-69	254.00
IUUC-Pno-095135	Phaeosphaeria nodorum	51.91	2.00e-87	314.00
IUUC-Ppa-095726	Physcomitrella patens	55.84	8.00e-115	405.00
IUUC-Pfo-096552	Poecilia formosa	45.28	1.00e-86	312.00
IUUC-Pab-098335	Pongo abelii	49.04	3.00e-84	304.00
IUUC-Pop-099370	Populus trichocarpa	81.48	5.00e-178	615.00
IUUC-Pca-100940	Procavia capensis	50.32	1.00e-82	298.00
IUUC-Ppe-102016	Prunus persica	79.63	1.00e-174	605.00
IUUC-Pva-102666	Pteropus vampyrus	48.72	2.00e-84	304.00
IUUC-Pgr-103321	Puccinia graminis	47.55	7.00e-88	316.00
IUUC-Ptt-103728	Puccinia triticina	47.55	7.00e-88	316.00
IUUC-Pte-104053	Pyrenophora teres	51.91	2.00e-87	315.00
IUUC-Pyt-104426	Pyrenophora triticirepentis	47.02	6.00e-77	280.00
IUUC-Rno-105834	Rattus norvegicus	49.04	4.00e-84	303.00
IUUC-Sce-106298	Saccharomyces cerevisiae	30.52	3.00e-48	185.00
IUUC-Sha-107632	Sarcophilus harrisii	50.32	8.00e-83	299.00
IUUC-Sja-107891	Schizosaccharomyces japonicus	35.96	4.00e-50	190.00
IUUC-Spo-108352	Schizosaccharomyces pombe	38.61	1.00e-55	208.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	52.55	2.00e-89	321.00
IUUC-Smo-109652	Selaginella moellendorffii	55.11	6.00e-103	366.00
IUUC-Sit-110441	Setaria italica	95.26	0.00e+00	713.00
IUUC-Sly-111784	Solanum lycopersicum	78.84	1.00e-171	594.00
IUUC-Stu-112400	Solanum tuberosum	79.10	1.00e-172	597.00
IUUC-Sar-113642	Sorex araneus	50.52	5.00e-76	276.00
IUUC-Sbi-114038	Sorghum bicolor	95.00	0.00e+00	704.00
IUUC-Sre-115035	Sporisorium reilianum	48.11	8.00e-90	322.00
IUUC-Ssc-115886	Sus scrofa	49.04	2.00e-84	305.00
IUUC-Tgu-116461	Taeniopygia guttata	50.32	1.00e-85	308.00
IUUC-Tru-117828	Takifugu rubripes	51.28	2.00e-87	315.00
IUUC-Tsy-119354	Tarsius syrichta	49.68	6.00e-82	296.00
IUUC-Tni-120216	Tetraodon nigroviridis	51.28	1.00e-84	305.00
IUUC-Tca-121224	Theobroma cacao	80.95	9.00e-176	608.00
IUUC-Tre-122156	Trichoderma reesei	50.29	3.00e-91	327.00
IUUC-Tvi-122640	Trichoderma virens	50.29	3.00e-91	327.00
IUUC-Tae-125653	Triticum aestivum	94.74	0.00e+00	701.00
IUUC-Tur-126755	Triticum urartu	93.22	0.00e+00	662.00
IUUC-Tme-126886	Tuber melanosporum	48.65	5.00e-93	333.00
IUUC-Tbe-127469	Tupaia belangeri	41.40	2.00e-67	248.00
IUUC-Ttr-128403	Tursiops truncatus	50.32	1.00e-82	298.00
IUUC-Uma-129589	Ustilago maydis	48.39	9.00e-91	326.00
IUUC-Vda-129855	Verticillium dahliae	53.18	1.00e-90	325.00
IUUC-Vpa-130173	Vicugna pacos	41.04	5.00e-51	194.00
IUUC-Vvi-131162	Vitis vinifera	80.69	1.00e-175	608.00
IUUC-Xtr-132928	Xenopus tropicalis	49.36	3.00e-85	307.00
IUUC-Xma-133418	Xiphophorus maculatus	45.55	7.00e-87	313.00
IUUC-Yli-134396	Yarrowia lipolytica	34.99	4.00e-53	201.00
IUUC-Zma-135893	Zea mays	94.74	0.00e+00	702.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence