iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mlu-067999

Ensembl Protein ID

ENSMLUP00000016072.2

UniProt Accession

G1PXA8; G1PXA8_MYOLU

Genbank Protein ID

ENSMLUP00000016072

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02016302

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000017622.2	ENSMLUT00000017626.2	ENSMLUP00000016072.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.80e-19	69.3	168	205
ULD/UDP/UBQ/UBQ_PIM	1.20e-17	63.7	1	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 168  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 205
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 23   veelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    VKALKEKIESERGkdaFPVSGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 56
           899**************************************************997 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

VKALKEKIES ERGKDAFPVS GQKLIYAGKI LNDDTALKEY KIDEKNFVVV MVTKPKAVTT 60
PAPTTTQQSN LTTTTTVSSS TAPAVAQVPT PTPALAPTPT PTPTPPASAT ASSEPAPVSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAAAGCAC TGAAAGAGAA GATTGAATCT GAAAGGGGGA AAGATGCCTT TCCTGTATCT 60
GGTCAGAAGT TAATTTATGC AGGTATGGAT TGAACATTGA AATTAATGTG CTATTTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	93.28	2.00e-86	312.00
IUUC-Apl-003371	Anas platyrhynchos	84.45	2.00e-92	332.00
IUUC-Aca-004599	Anolis carolinensis	79.86	6.00e-91	327.00
IUUC-Acl-008212	Aspergillus clavatus	46.32	7.00e-19	88.20
IUUC-Afl-008605	Aspergillus flavus	43.48	5.00e-19	89.00
IUUC-Afu-008877	Aspergillus fumigatus	44.85	2.00e-18	86.70
IUUC-Aor-010032	Aspergillus oryzae	43.48	7.00e-19	88.20
IUUC-Ate-010458	Aspergillus terreus	40.80	2.00e-30	126.00
IUUC-Ame-011107	Astyanax mexicanus	56.52	4.00e-47	182.00
IUUC-Bta-012922	Bos taurus	96.19	2.00e-96	346.00
IUUC-Bdi-014253	Brachypodium distachyon	36.51	2.00e-34	140.00
IUUC-Bol-015354	Brassica oleracea	37.55	6.00e-37	148.00
IUUC-Cja-018772	Callithrix jacchus	94.40	3.00e-95	342.00
IUUC-Cfa-020683	Canis familiaris	93.26	4.00e-92	331.00
IUUC-Cpo-022145	Cavia porcellus	88.77	1.00e-92	333.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	37.16	2.00e-29	122.00
IUUC-Csa-023714	Chlorocebus sabaeus	91.00	3.00e-128	451.00
IUUC-Cho-024814	Choloepus hoffmanni	70.65	2.00e-71	262.00
IUUC-Cin-025741	Ciona intestinalis	40.18	2.00e-36	145.00
IUUC-Dre-028369	Danio rerio	73.06	1.00e-80	293.00
IUUC-Dno-029543	Dasypus novemcinctus	94.40	2.00e-98	352.00
IUUC-Dse-031336	Dothistroma septosporum	46.72	4.00e-17	82.40
IUUC-Ete-032583	Echinops telfairi	80.17	1.00e-62	233.00
IUUC-Eca-034243	Equus caballus	96.61	3.00e-95	341.00
IUUC-Eeu-034721	Erinaceus europaeus	87.26	4.00e-69	254.00
IUUC-Fca-035679	Felis catus	92.27	6.00e-119	420.00
IUUC-Fal-037148	Ficedula albicollis	79.34	5.00e-88	318.00
IUUC-Fox-037960	Fusarium oxysporum	42.65	2.00e-15	76.60
IUUC-Gmo-039080	Gadus morhua	61.32	4.00e-59	221.00
IUUC-Ggr-040116	Gaeumannomyces graminis	45.59	9.00e-16	77.80
IUUC-Gga-040544	Gallus gallus	78.91	2.00e-92	332.00
IUUC-Gma-043743	Glycine max	35.06	2.00e-39	156.00
IUUC-Ggo-045125	Gorilla gorilla	95.40	8.00e-92	330.00
IUUC-Hsa-046519	Homo sapiens	95.40	8.00e-92	330.00
IUUC-Hvu-047832	Hordeum vulgare	36.90	9.00e-35	140.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	88.81	7.00e-84	304.00
IUUC-Kpa-049314	Komagataella pastoris	37.45	1.00e-29	123.00
IUUC-Lch-050553	Latimeria chalumnae	72.12	1.00e-73	270.00
IUUC-Lpe-050801	Leersia perrieri	34.41	3.00e-34	139.00
IUUC-Loc-051748	Lepisosteus oculatus	75.53	1.00e-74	273.00
IUUC-Laf-054293	Loxodonta africana	93.66	3.00e-94	338.00
IUUC-Mcc-055600	Macaca mulatta	94.78	2.00e-97	348.00
IUUC-Meu-056082	Macropus eugenii	66.30	2.00e-66	246.00
IUUC-Mor-057287	Magnaporthe oryzae	46.03	2.00e-14	73.60
IUUC-Mpo-057609	Magnaporthe poae	45.80	4.00e-15	75.50
IUUC-Mtr-058148	Medicago truncatula	36.02	2.00e-41	162.00
IUUC-Mla-058961	Melampsora laricipopulina	45.93	7.00e-25	108.00
IUUC-Mga-060060	Meleagris gallopavo	49.02	5.00e-15	75.10
IUUC-Mvi-060220	Microbotryum violaceum	45.11	4.00e-21	96.30
IUUC-Mmr-061159	Microcebus murinus	94.14	1.00e-91	330.00
IUUC-Mdo-061967	Monodelphis domestica	86.55	9.00e-85	306.00
IUUC-Mmu-063258	Mus musculus	90.41	6.00e-103	367.00
IUUC-Mac-065180	Musa acuminata	36.99	2.00e-37	149.00
IUUC-Mpu-066389	Mustela putorius furo	93.70	1.00e-86	313.00
IUUC-Nfi-068390	Neosartorya fischeri	45.59	2.00e-18	86.70
IUUC-Ncr-068685	Neurospora crassa	44.12	7.00e-24	104.00
IUUC-Nle-069655	Nomascus leucogenys	94.78	4.00e-98	351.00
IUUC-Opr-070234	Ochotona princeps	96.43	4.00e-26	112.00
IUUC-Ocu-074831	Oryctolagus cuniculus	93.66	2.00e-93	335.00
IUUC-Oba-075872	Oryza barthii	33.98	3.00e-33	135.00
IUUC-Ogu-078101	Oryza glumaepatula	33.83	1.00e-33	137.00
IUUC-Ome-081652	Oryza meridionalis	33.83	1.00e-33	137.00
IUUC-Oni-082847	Oryza nivara	33.98	3.00e-33	135.00
IUUC-Opu-083789	Oryza punctata	34.59	7.00e-34	138.00
IUUC-Ola-086540	Oryzias latipes	64.78	3.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.17	4.00e-38	151.00
IUUC-Oga-088023	Otolemur garnettii	92.59	1.00e-97	350.00
IUUC-Oar-089964	Ovis aries	96.19	3.00e-95	342.00
IUUC-Ptr-091165	Pan troglodytes	95.40	1.00e-91	329.00
IUUC-Pan-092009	Papio anubis	93.36	4.00e-96	344.00
IUUC-Psi-093477	Pelodiscus sinensis	84.25	6.00e-80	290.00
IUUC-Ppa-095654	Physcomitrella patens	37.35	2.00e-36	146.00
IUUC-Pfo-097385	Poecilia formosa	64.32	3.00e-70	258.00
IUUC-Pab-097868	Pongo abelii	95.40	6.00e-91	327.00
IUUC-Pop-099774	Populus trichocarpa	36.72	4.00e-37	147.00
IUUC-Pca-100652	Procavia capensis	92.08	2.00e-66	246.00
IUUC-Pva-102137	Pteropus vampyrus	96.64	5.00e-97	347.00
IUUC-Ptt-103717	Puccinia triticina	44.53	6.00e-25	108.00
IUUC-Pte-104303	Pyrenophora teres	48.92	1.00e-19	90.50
IUUC-Pyt-104580	Pyrenophora triticirepentis	48.92	2.00e-19	90.10
IUUC-Rno-104844	Rattus norvegicus	90.74	3.00e-103	368.00
IUUC-Sce-106214	Saccharomyces cerevisiae	34.33	5.00e-13	68.90
IUUC-Sha-107073	Sarcophilus harrisii	89.92	2.00e-85	309.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	41.25	2.00e-37	149.00
IUUC-Spo-108298	Schizosaccharomyces pombe	41.87	2.00e-37	149.00
IUUC-Sar-112925	Sorex araneus	86.94	1.00e-84	306.00
IUUC-Sbi-113871	Sorghum bicolor	35.63	3.00e-33	135.00
IUUC-Ssc-116329	Sus scrofa	95.88	7.00e-101	360.00
IUUC-Tgu-116918	Taeniopygia guttata	79.34	4.00e-88	318.00
IUUC-Tru-118651	Takifugu rubripes	62.24	2.00e-71	262.00
IUUC-Tsy-118836	Tarsius syrichta	95.65	8.00e-47	181.00
IUUC-Tca-121661	Theobroma cacao	35.74	1.00e-36	147.00
IUUC-Tvi-122617	Trichoderma virens	44.85	4.00e-16	79.00
IUUC-Tae-124646	Triticum aestivum	35.89	5.00e-33	135.00
IUUC-Tbe-127493	Tupaia belangeri	77.86	1.00e-65	243.00
IUUC-Ttr-128464	Tursiops truncatus	95.51	7.00e-101	360.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	63.90
IUUC-Vda-129946	Verticillium dahliae	46.32	3.00e-17	82.80
IUUC-Vpa-130357	Vicugna pacos	89.13	4.00e-63	234.00
IUUC-Vvi-130842	Vitis vinifera	35.83	4.00e-38	152.00
IUUC-Xtr-132679	Xenopus tropicalis	81.74	4.00e-66	244.00
IUUC-Xma-133503	Xiphophorus maculatus	59.53	5.00e-70	258.00
IUUC-Yli-134615	Yarrowia lipolytica	41.94	2.00e-37	149.00
IUUC-Zma-135678	Zea mays	36.11	5.00e-34	138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence