iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098838

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_1112843; POPTR_0005s03900g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s03900	POPTR_0005s03900.1	POPTR_0005s03900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.80e-08	33.7	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  ++ +++ p C Hvfh dC+ +w         + +CP+Cr
   Q: 129  CAVCLNEFeeDETLRLIPnCDHVFHPDCIGAW------LESHTTCPVCR 171
           ********76444888889*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MYTMDSYRFT HMILPLLVLF ILSTPHGVVS QTTNTNDGQP YNYARVTPSM AIIIVVLIAV 60
LFIMGFFSIY IRHCNEANGN GSIRPLGMGG LSRRVAASRG LDPAVIETFP TLIYSVVKGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATAGCCATA ACCCTTTCTC TCCATTTCCG TTCTTCACCC CGTGCCCTAC CTGGCGCACT 60
CTCAAAAACA TAAAAACCCT CGAACAGAAC TGAACTTAAC TATACCACTT CCTGTCTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s03900g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002716	Amborella trichopoda	44.55	8.00e-59	220.00
IUUC-Aly-005713	Arabidopsis lyrata	52.08	1.00e-71	262.00
IUUC-Ath-006746	Arabidopsis thaliana	51.76	7.00e-72	263.00
IUUC-Bdi-014474	Brachypodium distachyon	60.45	4.00e-46	178.00
IUUC-Bra-017552	Brassica rapa	45.78	4.00e-65	241.00
IUUC-Dno-029343	Dasypus novemcinctus	29.38	2.00e-15	75.50
IUUC-Hvu-047493	Hordeum vulgare	43.54	8.00e-50	189.00
IUUC-Kpa-049210	Komagataella pastoris	49.02	1.00e-09	55.50
IUUC-Mtr-058791	Medicago truncatula	58.44	3.00e-78	284.00
IUUC-Mac-064740	Musa acuminata	37.88	1.00e-39	156.00
IUUC-Ogu-078122	Oryza glumaepatula	53.55	1.00e-41	163.00
IUUC-Oru-084417	Oryza rufipogon	53.55	1.00e-41	163.00
IUUC-Ppa-095506	Physcomitrella patens	34.93	2.00e-28	119.00
IUUC-Rno-104966	Rattus norvegicus	28.34	1.00e-15	76.60
IUUC-Sha-106505	Sarcophilus harrisii	28.48	2.00e-14	72.00
IUUC-Sbi-114136	Sorghum bicolor	62.31	3.00e-44	171.00
IUUC-Ssc-116294	Sus scrofa	29.38	2.00e-15	75.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence