iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132051

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 50

Genbank Nucleotide ID

AAMC01124587

Gene Name

trim50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000000655.3	ENSXETT00000001437.3	ENSXETP00000001437.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-08	33.6	13	77
E3 activity/RING/RING	4.30e-10	40.1	16	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrliqa 67
           ++ CpI le++++P +l++G+++ ++++   +a+++    cPv+rq ++ ++  Pn t+++li+ 
   Q: 13   QLTCPICLEVFKEPLMLQCGHSFCKECLWGLMAESRIhlLCPVCRQAVDCSSSPPNVTVKHLIET 77
           689*************************88888777789************************86 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle fk+ pl l+CgH f+++Cl  w gl+ +s+ + +CP+Cr
   Q: 16   CPICLEVFKE-PLMLQCGHSFCKECL--W-GLMAESRIHLLCPVCR 57
           ********99.999************..9.***************8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

AAMASNIRHL ENQLTCPICL EVFKEPLMLQ CGHSFCKECL WGLMAESRIH LLCPVCRQAV 60
DCSSSPPNVT VKHLIETLQK LNEEQTAAES CQSHHNPLSL YCEQDQKIIC GLCGTIGEHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCGATGG CTAGTAACAT TAGACATTTG GAGAACCAGT TGACATGCCC CATTTGCCTA 60
GAAGTGTTTA AGGAACCTTT GATGTTACAG TGTGGACATT CCTTCTGCAA GGAGTGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001406	Ailuropoda melanoleuca	54.79	2.00e-162	565.00
IUUC-Apl-004051	Anas platyrhynchos	60.69	3.00e-173	601.00
IUUC-Ame-010964	Astyanax mexicanus	54.70	2.00e-159	555.00
IUUC-Bgr-012267	Blumeria graminis	31.11	2.00e-09	58.20
IUUC-Bta-012642	Bos taurus	56.05	6.00e-161	560.00
IUUC-Cel-018405	Caenorhabditis elegans	25.14	2.00e-11	62.80
IUUC-Cja-019011	Callithrix jacchus	53.98	3.00e-145	508.00
IUUC-Cfa-020270	Canis familiaris	55.41	1.00e-161	562.00
IUUC-Cpo-022458	Cavia porcellus	56.87	2.00e-162	565.00
IUUC-Csa-023478	Chlorocebus sabaeus	55.84	1.00e-161	562.00
IUUC-Dno-028894	Dasypus novemcinctus	56.13	1.00e-160	558.00
IUUC-Dor-030228	Dipodomys ordii	52.95	3.00e-140	491.00
IUUC-Eca-033497	Equus caballus	55.83	2.00e-165	575.00
IUUC-Eeu-034910	Erinaceus europaeus	50.50	3.00e-86	311.00
IUUC-Fca-036164	Felis catus	55.00	2.00e-164	572.00
IUUC-Gga-040573	Gallus gallus	54.10	3.00e-96	345.00
IUUC-Ggo-044471	Gorilla gorilla	55.96	2.00e-162	565.00
IUUC-Hsa-046039	Homo sapiens	55.96	4.00e-162	564.00
IUUC-Itr-048897	Ictidomys tridecemlineatus	55.60	2.00e-157	548.00
IUUC-Kpa-049137	Komagataella pastoris	42.25	1.00e-08	53.90
IUUC-Lch-050638	Latimeria chalumnae	57.88	6.00e-166	577.00
IUUC-Loc-051971	Lepisosteus oculatus	57.62	7.00e-166	576.00
IUUC-Laf-054291	Loxodonta africana	53.83	6.00e-156	543.00
IUUC-Mcc-055708	Macaca mulatta	55.41	2.00e-160	558.00
IUUC-Meu-056670	Macropus eugenii	50.44	5.00e-95	341.00
IUUC-Mga-059415	Meleagris gallopavo	60.69	2.00e-175	608.00
IUUC-Mmr-061410	Microcebus murinus	55.82	2.00e-154	538.00
IUUC-Mmu-064094	Mus musculus	55.60	1.00e-160	558.00
IUUC-Mpu-065781	Mustela putorius furo	55.46	2.00e-161	561.00
IUUC-Mlu-067974	Myotis lucifugus	55.41	3.00e-162	564.00
IUUC-Nle-069000	Nomascus leucogenys	55.96	2.00e-162	565.00
IUUC-Opr-071216	Ochotona princeps	66.34	4.00e-84	305.00
IUUC-Ocu-074859	Oryctolagus cuniculus	57.11	2.00e-165	575.00
IUUC-Oga-088285	Otolemur garnettii	56.03	3.00e-164	571.00
IUUC-Oar-090161	Ovis aries	50.84	5.00e-136	477.00
IUUC-Ptr-091672	Pan troglodytes	55.96	3.00e-162	564.00
IUUC-Pan-092870	Papio anubis	55.41	2.00e-160	558.00
IUUC-Psi-093742	Pelodiscus sinensis	62.50	0.00e+00	644.00
IUUC-Pab-098034	Pongo abelii	55.96	2.00e-162	565.00
IUUC-Pva-103234	Pteropus vampyrus	56.54	5.00e-161	560.00
IUUC-Rno-105163	Rattus norvegicus	55.30	1.00e-160	559.00
IUUC-Sha-106575	Sarcophilus harrisii	45.19	1.00e-108	386.00
IUUC-Ssc-115600	Sus scrofa	55.72	2.00e-161	562.00
IUUC-Tbe-128151	Tupaia belangeri	59.32	2.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence