iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058461

Ensembl Protein ID

AES87702

UniProt Accession

G7JN65; G7JN65_MEDTR

Genbank Protein ID

AES87702.1

Protein Name

SCF ubiquitin ligase, SKP1 component

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g032400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g032400	AES87702	AES87702

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.70e-29	103.1	114	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLdltcktVadmikg+tpeeiRktFni nD+tpeEe++vR E qWA
   Q: 114  KSLLDLTCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWA 161
           89*********************************************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSDGVESSTA TKKITLKSSD NETFEIEKAV ALESQTIKHL IDDNCADDSG IPLPNVTGKI 60
LAMVIEHCKK HVDATSSDEK PSEDEINKWD TEFVKVDQDT LFDLILAANY LNIKSLLDLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGACG GTGTTGAATC ATCAACGGCG ACGAAGAAGA TCACACTGAA GAGTTCCGAC 60
AACGAGACCT TCGAAATTGA AAAGGCGGTG GCATTAGAAT CTCAAACGAT CAAGCATTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_4g032400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007847	Ashbya gossypii	41.01	1.00e-33	134.00
IUUC-Kpa-049138	Komagataella pastoris	41.53	3.00e-34	137.00
IUUC-Mla-059153	Melampsora laricipopulina	50.00	1.00e-39	154.00
IUUC-Mvi-060342	Microbotryum violaceum	52.50	2.00e-41	160.00
IUUC-Pgr-103499	Puccinia graminis	49.36	7.00e-38	148.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence