iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016715

Ensembl Protein ID

Bra025605.1-P

UniProt Accession

M4E9Z8; M4E9Z8_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra025605	Bra025605.1	Bra025605.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-16	61.2	59	132

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl...teedlvPnltlrrliqawceens 73
           e+p eflCpIs+ lM dPv+++sG++y+r+++      g +  P+ + p+   + ++++Pnl+l++ i +wc+++s
   Q: 59   EIPTEFLCPISGSLMADPVIVSSGHSYERACVIASKTLGFT--PTPSLPTsppDFSTVIPNLALKSAILSWCDRRS 132
           69******************************775555555..444444422155667**************9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEIQRPIIKL MVLHSNHDKS DNLSRRESLP GKSKWRISLS RSPSSSSSKS NNSSPSKTEI 60
PTEFLCPISG SLMADPVIVS SGHSYERACV IASKTLGFTP TPSLPTSPPD FSTVIPNLAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATTC AACGACCAAT CATCAAGCTC ATGGTTCTCC ACTCAAACCA CGACAAAAGC 60
GACAACCTTT CCCGACGAGA ATCTCTCCCC GGCAAATCCA AATGGAGAAT CTCCTTATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	44.75	2.00e-67	250.00
IUUC-Aly-005518	Arabidopsis lyrata	84.34	0.00e+00	855.00
IUUC-Ath-006703	Arabidopsis thaliana	84.16	0.00e+00	869.00
IUUC-Bdi-014649	Brachypodium distachyon	35.11	2.00e-68	252.00
IUUC-Bol-015923	Brassica oleracea	95.67	0.00e+00	921.00
IUUC-Lpe-050893	Leersia perrieri	35.74	2.00e-57	216.00
IUUC-Mac-064560	Musa acuminata	42.71	7.00e-49	187.00
IUUC-Ppe-101810	Prunus persica	54.44	9.00e-135	473.00
IUUC-Sit-109782	Setaria italica	34.47	7.00e-56	211.00
IUUC-Sly-111131	Solanum lycopersicum	56.58	8.00e-132	463.00
IUUC-Stu-112864	Solanum tuberosum	56.42	3.00e-123	434.00
IUUC-Sbi-113814	Sorghum bicolor	34.80	2.00e-47	182.00
IUUC-Tca-121304	Theobroma cacao	61.39	3.00e-151	528.00
IUUC-Tae-123306	Triticum aestivum	36.62	2.00e-69	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence