iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044210

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000840

Gene Name

LOC100815448; GLYMA_07G216200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA07G33980	GLYMA07G33980.1	GLYMA07G33980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-33	115.0	275	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+flCpIslelMrdPv++++G+ty+rs+I++w++ g++tcP+t+q+l++ +l+Pn++lr+li++wc e+++
   Q: 275  IPEDFLCPISLELMRDPVIVATGQTYERSYIQRWIDCGNTTCPKTQQKLQHLTLTPNYVLRSLISQWCIEHNI 347
           8*******************************************************************99976 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAGDDLAGDH TPELLCLVHE IAGMCSAGSS SGADAMFRKD CTDLVRRISL LTHLFEEIKE 60
LKNNNDVGGS ASSSSSYSSS SSSASSKWSS DLVLALHSAR RLLSVARNFR SYCSSDGAAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACATGTGGAC ATTTAACAAG TCTCTTCACA CAAACACCTT ATTAGACTCT CTCTGACTTT 60
CCTCGAACAC AACACACAAC AACATAGTTA GCCTTAGCCT TAATAACCTT AGCAGCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100815448

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	56.62	1.00e-166	579.00
IUUC-Bdi-014341	Brachypodium distachyon	54.27	3.00e-171	595.00
IUUC-Hvu-047676	Hordeum vulgare	67.97	4.00e-136	477.00
IUUC-Mtr-058156	Medicago truncatula	85.13	0.00e+00	1061.00
IUUC-Mac-065650	Musa acuminata	52.43	7.00e-161	560.00
IUUC-Obr-076820	Oryza brachyantha	63.09	1.00e-155	542.00
IUUC-Olo-080348	Oryza longistaminata	57.24	3.00e-170	591.00
IUUC-Pop-099907	Populus trichocarpa	66.82	0.00e+00	816.00
IUUC-Ppe-101146	Prunus persica	66.32	0.00e+00	789.00
IUUC-Ptt-103922	Puccinia triticina	29.67	7.00e-10	57.80
IUUC-Sit-110422	Setaria italica	55.96	3.00e-156	545.00
IUUC-Sly-111534	Solanum lycopersicum	63.04	0.00e+00	746.00
IUUC-Stu-112138	Solanum tuberosum	63.77	0.00e+00	756.00
IUUC-Ssc-116061	Sus scrofa	27.35	1.00e-13	72.80
IUUC-Tca-121496	Theobroma cacao	69.38	0.00e+00	845.00
IUUC-Tae-125340	Triticum aestivum	57.58	3.00e-165	575.00
IUUC-Tur-126634	Triticum urartu	56.75	3.00e-149	521.00
IUUC-Tbe-127244	Tupaia belangeri	30.39	2.00e-09	57.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence