iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130926

UUCD1 version

UUC-ViV-00014

Ensembl Protein ID

VIT_12s0057g00720.t01

UniProt Accession

A5B021; A5B021_VITVI

Genbank Protein ID

CAN67350.1; CCB51725.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM441972; FN595759

Gene Name

SLY2; VIT_12s0057g00720; VITISV_018090

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0057g00720	VIT_12s0057g00720.t01	VIT_12s0057g00720.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	56.49	2.00e-34	142.00	IUUC-Ath-007127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MVQLLCRSKF QRGMGHGEKE KKPRFFINDN TDILMEILKR LDGRSLGVAA CVCRLWRSVT 60
WNDSLWEHLC FRHVSPPPPG VRPVVVALGG YRRLYMMCLR PVLSRLGQMK RGLGGSGGGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAAACCAG CTACTTCAGT CTCAGAACTC TCTCTTTTTG TATAACAATG GTGCAACTAC 60
TATGCAGAAG CAAGTTCCAG AGAGGCATGG GTCATGGGGA GAAGGAGAAG AAGCCCAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0000151--C:ubiquitin ligase complex
GO:0009740--P:gibberellic acid mediated signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0009937--P:regulation of gibberellic acid mediated signaling pathway
GO:0048831--P:regulation of shoot system development

KEGG

vvi:100245985

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002846	Amborella trichopoda	40.29	4.00e-19	86.30
IUUC-Aly-005539	Arabidopsis lyrata	58.28	4.00e-37	146.00
IUUC-Ath-007127	Arabidopsis thaliana	57.62	4.00e-36	142.00
IUUC-Bdi-014290	Brachypodium distachyon	65.31	9.00e-15	72.00
IUUC-Bol-015233	Brassica oleracea	57.62	2.00e-36	144.00
IUUC-Bra-017984	Brassica rapa	57.62	2.00e-36	144.00
IUUC-Gac-041813	Gasterosteus aculeatus	44.44	1.00e-01	29.60
IUUC-Gma-043632	Glycine max	68.83	5.00e-46	175.00
IUUC-Lpe-050816	Leersia perrieri	65.31	3.00e-07	47.00
IUUC-Loc-052597	Lepisosteus oculatus	41.46	7.00e-04	35.80
IUUC-Mtr-057946	Medicago truncatula	62.99	3.00e-41	159.00
IUUC-Ogl-077474	Oryza glaberrima	65.31	2.00e-07	47.40
IUUC-Ogu-079029	Oryza glumaepatula	65.31	2.00e-07	47.40
IUUC-Oin-080121	Oryza indica	65.31	2.00e-07	47.40
IUUC-Ome-081968	Oryza meridionalis	65.31	3.00e-07	45.40
IUUC-Oni-082552	Oryza nivara	65.31	2.00e-07	47.40
IUUC-Opu-083746	Oryza punctata	65.31	2.00e-07	48.10
IUUC-Oru-084658	Oryza rufipogon	65.31	2.00e-07	47.40
IUUC-Osa-086295	Oryza sativa	65.31	2.00e-07	47.40
IUUC-Olu-087621	Ostreococcus lucimarinus	37.21	4.00e-03	36.60
IUUC-Pop-099566	Populus trichocarpa	71.71	6.00e-41	158.00
IUUC-Pca-100414	Procavia capensis	42.86	1.00e-03	34.30
IUUC-Ppe-102106	Prunus persica	65.06	8.00e-41	158.00
IUUC-Sly-111364	Solanum lycopersicum	60.48	1.00e-38	150.00
IUUC-Stu-112502	Solanum tuberosum	61.59	6.00e-39	152.00
IUUC-Sbi-114231	Sorghum bicolor	67.35	2.00e-07	47.80
IUUC-Tae-124891	Triticum aestivum	65.31	8.00e-15	72.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence