iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2616__AT5G65670.1	fgenesh2_kg.8__2616__AT5G65670.1	fgenesh2_kg.8__2616__AT5G65670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.20e-16	59.0	217	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedG 52
           ++vkvs++g+++++++dl+++ ++ +L +a+++ +t                          l+++++ l+YeD+dG
   Q: 217  LFVKVSMDGAPYLRKVDLRSYANYGELSSALEKmFTtftlgqcgsngaagkdmlsetklkdLLNGKDYVLTYEDKDG 293
           58*******************************844688*********************99999************ PP
   S: 53   DlvtlksDedldkavsllaskksllrlliqk 83
           D++ l++D++++++++       +++l i+k
   Q: 294  DWM-LVGDVPWEMFID------VCKKLKIMK 317
           ***.************......688888876 PP

Organism

Arabidopsis lyrata

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSTEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL SLLAEDDKAT 60
ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL LPSKDEICSS SQKNNASGNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAATCTC GGCTACGAGT TTCTGGGTGA TGATACTTAA GCTTTTTTTC TTTCTGCTTT 60
GCTTTAATGG AAGGACCTTG ACACTTCTCT CTCTCCCTTT CTCTTTGCTA TTCATCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

aly:ARALYDRAFT_496800

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002452	Amborella trichopoda	50.87	5.00e-82	296.00
IUUC-Ath-007607	Arabidopsis thaliana	99.11	0.00e+00	627.00
IUUC-Bol-015732	Brassica oleracea	85.50	2.00e-151	527.00
IUUC-Bra-017890	Brassica rapa	73.46	2.00e-113	400.00
IUUC-Cel-018552	Caenorhabditis elegans	56.25	2.90e-01	27.30
IUUC-Dre-028718	Danio rerio	36.84	2.00e-01	28.10
IUUC-Gma-043823	Glycine max	65.12	1.00e-107	382.00
IUUC-Mtr-058323	Medicago truncatula	64.50	4.00e-109	387.00
IUUC-Mac-064563	Musa acuminata	50.97	6.00e-75	273.00
IUUC-Ome-081266	Oryza meridionalis	57.52	2.00e-48	184.00
IUUC-Opu-083799	Oryza punctata	62.68	1.00e-45	175.00
IUUC-Pop-099102	Populus trichocarpa	57.78	1.00e-98	352.00
IUUC-Ppe-101672	Prunus persica	60.53	2.00e-113	401.00
IUUC-Smo-109586	Selaginella moellendorffii	50.58	2.00e-41	162.00
IUUC-Sly-111221	Solanum lycopersicum	44.94	2.00e-60	225.00
IUUC-Stu-112219	Solanum tuberosum	59.36	3.00e-96	344.00
IUUC-Tca-121767	Theobroma cacao	64.53	8.00e-118	416.00
IUUC-Vvi-131708	Vitis vinifera	58.65	4.00e-93	334.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence