iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121378

Ensembl Protein ID

EOY15562

UniProt Accession

A0A061FFR0; A0A061FFR0_THECC

Genbank Protein ID

EOY15561.1; EOY15562.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM001886; CM001886

Gene Name

TCM_034577

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034577	EOY15562	EOY15562

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.60e-15	57.3	249	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavsllaskksl 76
           ++vkvs++g+++++++dl+ + k+++L +a+++ +                           l +se+ l+YeD+dGD++ l++D+++ +++        +
   Q: 249  LFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKmFScftigqygshgtlgrellsesklkdLLHGSEYVLTYEDKDGDWM-LVGDVPWVMFIG------TC 342
           58*******************************72256799*******************99999***************.************......9* PP
   S: 77   lrlliqk 83
           +rl+i+k
   Q: 343  KRLRIMK 349
           *****97 PP

Organism

Theobroma cacao

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSPPLLGVEE EGGQSNVTCL GSSGSMDSVC QNSAELKERN YMGLSDCSSV DSSVGSPVSE 60
ESKGNLNLKA TELRLGLPGS QSPKRNPELC LLSSPQLDEK PLFPLHPSSD GHCSASQKTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATAAGCTT TTGTTACTTT GTGACCAATG GAGGGTCCTT AGCTCTCTCT CTCTCTCTCT 60
CTGAAAAACA AAACCAGAAA AAAAGAAGGG AAATACTTTC TCTTCTTAGT TCTTGCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003220	Anas platyrhynchos	32.08	3.10e-02	32.00
IUUC-Aca-004830	Anolis carolinensis	32.08	3.30e-02	31.60
IUUC-Dre-027983	Danio rerio	22.22	6.50e-01	28.50
IUUC-Gga-040715	Gallus gallus	32.08	4.00e-02	31.60
IUUC-Gma-043352	Glycine max	73.98	2.00e-141	494.00
IUUC-Lch-049822	Latimeria chalumnae	30.19	2.60e-01	29.30
IUUC-Loc-052903	Lepisosteus oculatus	30.56	1.30e+00	27.70
IUUC-Psi-093566	Pelodiscus sinensis	32.08	3.50e-02	32.00
IUUC-Pop-099102	Populus trichocarpa	79.89	3.00e-153	533.00
IUUC-Ppe-101376	Prunus persica	72.00	2.00e-145	507.00
IUUC-Smo-109586	Selaginella moellendorffii	34.19	2.00e-43	169.00
IUUC-Stu-112219	Solanum tuberosum	69.92	4.00e-129	453.00
IUUC-Tgu-117454	Taeniopygia guttata	32.08	3.70e-02	32.00
IUUC-Vpa-130130	Vicugna pacos	33.33	1.50e-01	30.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence