iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110461

Ensembl Protein ID

Si006159m

UniProt Accession

K3XW51; K3XW51_SETIT

Genbank Protein ID

KQL08888.1; KQL08889.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003531; CM003531

Gene Name

SETIT_006159mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si006159m.g	Si006159m	Si006159m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.00e-36	123.1	185	257

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIslelM+dPv+++sG+ty+r +I+kwl+sg+ktcP+t+qpl++++l+Pn +l++li +wce+n++
   Q: 185  IPDEFRCPISLELMQDPVIVSSGQTYERPCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLIAQWCEANGI 257
           79********************************************************************986 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MPARLAAEIA ALPEPRGPMR RLCGDLARRI RLLAPLLQQD QLQDALPLAD ALGAARDLLR 60
AVHDGSKIYQ VALVHSQFKR AATRMDPPDA QLSKDISSAL ADKTFDPLVF TRISEKLQLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGTCCTGC GTTTCCTTGC GTTTAGAGGG GAGGGGAGGG GAGGGGAGGT TGGTGAGGGC 60
GGCGGCGGTG GCCACCGCGT TCGTCGTCAA TTCAGTTGCA TCGGATCGGA TCTCGGTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006103	Arabidopsis lyrata	56.44	6.00e-176	610.00
IUUC-Ath-006994	Arabidopsis thaliana	55.93	4.00e-175	607.00
IUUC-Bdi-014691	Brachypodium distachyon	86.99	0.00e+00	876.00
IUUC-Bol-016160	Brassica oleracea	55.28	5.00e-175	607.00
IUUC-Bra-016727	Brassica rapa	55.12	2.00e-174	605.00
IUUC-Gma-043634	Glycine max	58.11	0.00e+00	675.00
IUUC-Hvu-047272	Hordeum vulgare	84.18	0.00e+00	842.00
IUUC-Itr-048039	Ictidomys tridecemlineatus	30.22	8.00e-10	59.70
IUUC-Lpe-051517	Leersia perrieri	86.99	0.00e+00	844.00
IUUC-Mtr-057651	Medicago truncatula	57.14	0.00e+00	627.00
IUUC-Mac-064891	Musa acuminata	54.52	3.00e-168	584.00
IUUC-Oba-075750	Oryza barthii	87.37	0.00e+00	877.00
IUUC-Obr-076793	Oryza brachyantha	82.64	0.00e+00	852.00
IUUC-Ogl-077380	Oryza glaberrima	87.37	0.00e+00	877.00
IUUC-Ogu-078219	Oryza glumaepatula	75.91	0.00e+00	882.00
IUUC-Oin-079724	Oryza indica	79.60	0.00e+00	920.00
IUUC-Olo-080320	Oryza longistaminata	67.17	0.00e+00	730.00
IUUC-Ome-081932	Oryza meridionalis	75.79	0.00e+00	884.00
IUUC-Oni-082439	Oryza nivara	87.17	0.00e+00	875.00
IUUC-Opu-083837	Oryza punctata	79.27	0.00e+00	917.00
IUUC-Oru-085172	Oryza rufipogon	75.91	0.00e+00	880.00
IUUC-Osa-085991	Oryza sativa	86.99	0.00e+00	874.00
IUUC-Pop-099229	Populus trichocarpa	58.64	0.00e+00	654.00
IUUC-Ppe-101965	Prunus persica	54.39	6.00e-178	616.00
IUUC-Sly-111662	Solanum lycopersicum	58.64	0.00e+00	668.00
IUUC-Stu-111979	Solanum tuberosum	58.47	0.00e+00	662.00
IUUC-Sbi-114550	Sorghum bicolor	82.86	0.00e+00	948.00
IUUC-Ssc-116061	Sus scrofa	30.27	3.00e-11	64.30
IUUC-Tca-121269	Theobroma cacao	58.46	0.00e+00	660.00
IUUC-Tae-124061	Triticum aestivum	78.85	0.00e+00	879.00
IUUC-Tur-126276	Triticum urartu	81.95	0.00e+00	812.00
IUUC-Tbe-127613	Tupaia belangeri	32.64	3.00e-08	53.90
IUUC-Ttr-128612	Tursiops truncatus	30.39	1.00e-12	68.90
IUUC-Vvi-131729	Vitis vinifera	59.80	0.00e+00	666.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence