iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__2389__AT2G42360.1	fgenesh2_kg.4__2389__AT2G42360.1	fgenesh2_kg.4__2389__AT2G42360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.30e-06	27.1	108	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ +  +d  + lp C+H+fh dC+  w        +  +CP+Cr
   Q: 108  CAVCLSVLeeQDTARELPnCKHIFHVDCVDTW------LTTCPTCPVCR 150
           ****999955333777888*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSSNDRDPHW FNSQHHSFWP NPSSYDLNSK IMLAAVASLS GVILIVFALH LYARFVLRRR 60
REAFRGLPVV FRHSFEMPKR GLNPAVIASL PTFTVRTTDG VATSATECAV CLSVLEEQDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATAAGAT ATTCTAAAAG TCCTTTATTC CCTCATATAA TACATCAGAA GTTAGTAACC 60
AATTTTGTTC ACTTTCCTTT CCCATCCACT GAAGAAAAAA GGCTTCACAA TGAGCTCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_483329

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007071	Arabidopsis thaliana	91.10	3.00e-98	350.00
IUUC-Bta-013573	Bos taurus	42.53	7.00e-13	65.50
IUUC-Bol-016176	Brassica oleracea	69.55	3.00e-72	263.00
IUUC-Bra-016906	Brassica rapa	67.63	8.00e-73	265.00
IUUC-Hvu-047434	Hordeum vulgare	48.68	2.00e-19	88.60
IUUC-Oba-075575	Oryza barthii	36.13	2.00e-22	98.20
IUUC-Ogl-077104	Oryza glaberrima	36.13	2.00e-22	98.20
IUUC-Oin-079390	Oryza indica	36.13	2.00e-22	98.20
IUUC-Oni-082882	Oryza nivara	36.13	2.00e-22	98.20
IUUC-Oru-084452	Oryza rufipogon	36.13	4.00e-22	97.40
IUUC-Osa-085457	Oryza sativa	36.13	3.00e-22	97.80
IUUC-Pma-094624	Petromyzon marinus	56.25	5.00e-12	66.20
IUUC-Pop-098962	Populus trichocarpa	50.84	1.00e-32	132.00
IUUC-Ppe-101543	Prunus persica	46.84	6.00e-42	163.00
IUUC-Sit-110606	Setaria italica	36.25	8.00e-29	119.00
IUUC-Sly-111845	Solanum lycopersicum	39.81	8.00e-37	145.00
IUUC-Stu-112253	Solanum tuberosum	42.34	5.00e-47	180.00
IUUC-Sbi-113906	Sorghum bicolor	34.26	2.00e-26	112.00
IUUC-Tca-121522	Theobroma cacao	38.10	3.00e-31	127.00
IUUC-Tae-124538	Triticum aestivum	37.58	4.00e-23	100.00
IUUC-Vvi-130902	Vitis vinifera	44.13	4.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence