iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042863

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000851

Gene Name

LOC100789656; GLYMA_18G236600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G47120	GLYMA18G47120.1	GLYMA18G47120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-33	116.5	262	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+eflCpI+le+M+dPv++ sG+ty+r+sI+kw++s+++tcP+trqpl++ +l Pn +l++li++wce n+
   Q: 262  IPHEFLCPITLEIMTDPVIVTSGQTYERESIKKWFQSNHNTCPKTRQPLEHLSLAPNRALKSLIEEWCENNN 333
           89*******************************************************************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MTTMEEERDV SSDELSEEKY DPVEEIQRVI QSIVQFGEYR RTQRKESHNL VRRFKLMLPL 60
WEELRDLPQP FPEIGVTWLS KVKDVLLFAK DLLKLCSQGS KIHLALETEV VMITFQKVYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTCGAAAT ATACGGGCAA GCCCCAAAGG CATACAATGT AGGAATGGAA CTGACAACCC 60
CATATGATCA ACCAATCCCA TGAAAACTAA TAAACAGTTA GTTACATCAT TTGTCAACAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100789656

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002787	Amborella trichopoda	61.51	0.00e+00	712.00
IUUC-Aly-006301	Arabidopsis lyrata	64.60	0.00e+00	766.00
IUUC-Ath-007379	Arabidopsis thaliana	63.46	0.00e+00	754.00
IUUC-Bol-016076	Brassica oleracea	63.55	0.00e+00	775.00
IUUC-Bra-017350	Brassica rapa	63.45	0.00e+00	761.00
IUUC-Mtr-058419	Medicago truncatula	80.10	0.00e+00	989.00
IUUC-Sly-111424	Solanum lycopersicum	62.24	0.00e+00	782.00
IUUC-Stu-112097	Solanum tuberosum	62.56	0.00e+00	785.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence