iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099450

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_801629; POPTR_0005s27660g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s27660	POPTR_0005s27660.1	POPTR_0005s27660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.20e-09	37.3	107	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   d+ +vlp CgH fh  C+  w         + +CP Cr
   Q: 107  CAICLTEFsvGDEIRVLPqCGHGFHVACIDTW------LGSHSSCPSCR 149
           ********99666*******************......99********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTRPFRLLNA DMNSSATTTG SPPQPPATVD PDFMVILAAL LCALICVLGL IAVARCAWLR 60
RLSSHTPAPP VPLPPPSVAN KGLKKKTLRS LPKQTFSEDS AGKFSDCAIC LTEFSVGDEI 120

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Nucleotide Sequence
(Fasta)

GTCTCTCTCT CTCTAGCACG CACTCTCGAA AAATAAAAGA AACGAAACAG AGCTACTCTC 60
TATCCATCTC GCTAACATGA CTCGGCCTTT CAGGCTCCTA AACGCTGACA TGAACTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s27660g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002926	Amborella trichopoda	56.50	7.00e-26	109.00
IUUC-Gma-042991	Glycine max	71.30	3.00e-38	150.00
IUUC-Mac-064619	Musa acuminata	50.34	9.00e-30	122.00
IUUC-Ppe-101469	Prunus persica	59.63	7.00e-32	129.00
IUUC-Sly-111851	Solanum lycopersicum	73.88	4.00e-40	156.00
IUUC-Stu-112165	Solanum tuberosum	73.13	1.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence