iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058130

Ensembl Protein ID

KEH40088

UniProt Accession

A0A072VF61; A0A072VF61_MEDTR

Genbank Protein ID

KEH40088.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g021895

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g021895	KEH40088	KEH40088

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.80e-06	28.3	29	84
E3 activity/RING/RING	3.10e-07	32.3	32	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
            f C I ++l +dP ++ +G+ +   ++ kwl   s+ ++cPv+++ ++ee+lvP 
   Q: 29   NFECNICFDLAQDPIITLCGHLFCWPCLYKWLhfHSQSRECPVCKAMIEEEKLVPL 84
           599*****************************88777779**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++  +d p+++ CgH+f+  Cl+kw    ++ s++  CP+C+
   Q: 32   CNICFDLAQD-PIITLCGHLFCWPCLYKW---LHFHSQSRECPVCK 73
           99********.999***************...667999999****7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MASGFGESTS RSPPSPPYSS NNNNSDAGNF ECNICFDLAQ DPIITLCGHL FCWPCLYKWL 60
HFHSQSRECP VCKAMIEEEK LVPLYGRGKT STDPRSKSVP GVNIPHRPAG QRPETAPPPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTATTTATT TTTATTATTT TTGCAATTCG ATTTTCCAAC GGTCTTAACT TACAAACTTG 60
ATTTCTTCGA ATTTCGATTT TTGTTTCAAA TTTGTTGTCT AAAATGATTC AATTGAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g021895

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002444	Amborella trichopoda	60.10	1.00e-52	198.00
IUUC-Aly-006065	Arabidopsis lyrata	62.50	4.00e-57	213.00
IUUC-Ath-007267	Arabidopsis thaliana	61.98	2.00e-57	214.00
IUUC-Bol-015663	Brassica oleracea	59.13	2.00e-57	214.00
IUUC-Bra-017113	Brassica rapa	62.02	2.00e-64	237.00
IUUC-Cel-018228	Caenorhabditis elegans	53.12	2.00e-27	115.00
IUUC-Cre-022829	Chlamydomonas reinhardtii	53.76	3.00e-26	108.00
IUUC-Gma-043172	Glycine max	79.91	1.00e-74	271.00
IUUC-Mor-057077	Magnaporthe oryzae	44.07	2.00e-09	56.60
IUUC-Mpo-057431	Magnaporthe poae	42.00	5.00e-09	55.10
IUUC-Mac-065053	Musa acuminata	63.26	6.00e-50	190.00
IUUC-Obr-076382	Oryza brachyantha	79.12	2.00e-42	164.00
IUUC-Ogl-077553	Oryza glaberrima	58.70	3.00e-47	180.00
IUUC-Ogu-078463	Oryza glumaepatula	59.59	6.00e-45	172.00
IUUC-Oin-080177	Oryza indica	60.27	8.00e-46	176.00
IUUC-Ome-081605	Oryza meridionalis	80.22	3.00e-43	167.00
IUUC-Oni-082458	Oryza nivara	60.27	1.00e-45	176.00
IUUC-Opu-083362	Oryza punctata	64.46	3.00e-43	168.00
IUUC-Oru-084757	Oryza rufipogon	59.59	4.00e-45	173.00
IUUC-Osa-086198	Oryza sativa	59.59	3.00e-45	174.00
IUUC-Ppa-095474	Physcomitrella patens	57.14	1.00e-44	172.00
IUUC-Pop-098889	Populus trichocarpa	77.16	1.00e-72	265.00
IUUC-Ppe-101752	Prunus persica	71.55	7.00e-69	253.00
IUUC-Smo-109663	Selaginella moellendorffii	50.40	4.00e-32	129.00
IUUC-Sit-110376	Setaria italica	57.14	3.00e-44	171.00
IUUC-Sly-111909	Solanum lycopersicum	65.26	1.00e-54	205.00
IUUC-Stu-112117	Solanum tuberosum	64.71	5.00e-51	193.00
IUUC-Vda-129983	Verticillium dahliae	41.51	3.00e-09	54.30
IUUC-Vvi-131449	Vitis vinifera	72.77	3.00e-76	277.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence