iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108918

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB4

Genbank Nucleotide ID

GL377578

Gene Name

SELMODRAFT_410663

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_410663	EFJ28864	EFJ28864

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-31	108.9	242	315

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p++f+Cp+slelM dPv+++sG+ty+r++I+ wl++g++ cP+t++pl++ +l+Pn+t+++li +wc++n++
   Q: 242  QIPADFRCPLSLELMYDPVIVASGQTYERAYIQHWLDQGNTRCPKTGKPLAHINLIPNYTVKALIASWCQTNDV 315
           69*********************************************************************986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MENGTLLVDI ALSIRMIIHM CESAKSQQGN CLALAAQLRL LKQLFDELRQ SKFPLSDATI 60
EAFGSLQSAL QGAKEVLGQC SKGSKIYSFL KSPQCVDQFQ ELSAEIETIL SASRLALPRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAATG GGACGCTCCT GGTGGACATC GCGCTCTCCA TCCGTATGAT CATTCATATG 60
TGCGAGAGTG CCAAGTCGCA GCAGGGGAAT TGCTTGGCCC TGGCAGCGCA GCTCCGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_410663

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016192	Brassica oleracea	41.78	7.00e-119	420.00
IUUC-Sly-111511	Solanum lycopersicum	42.81	2.00e-107	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence