iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006314

UUCD1 version

UUC-ArL-01276

Ensembl Protein ID

fgenesh1_pm.C_scaffold_7001965

UniProt Accession

D7MDD5; D7MDD5_ARALL

Genbank Protein ID

EFH46338.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348719

Gene Name

UBP20; ARALYDRAFT_329738

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_7001965	fgenesh1_pm.C_scaffold_7001965	fgenesh1_pm.C_scaffold_7001965

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.20e-69	234.9	562	860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkke 80
           Gl NlgNtC++NSv Qc +++ +l e l   +k +++     ++  +++++l+  +e+ +  ++  ++p  +l+ l+ +
   Q: 562  GLWNLGNTCFLNSVFQCFTHTVPLIESLRA-YKYEVPCHC-GNEFFCVIRALRYHIEAALRPERCPIAPYYFLNNLNYF 638
           9****************************9.888888765.78999********************************* PP
   S: 81   aeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclec 159
           ++ f+ y+q+Da+Efl+ +l++le+                         +++   +++   +d+F g+l s ++c +c
   Q: 639  SPDFQRYQQEDAHEFLQAFLEKLERCG-----------------------SDRRSFHGNISSQDVFAGRLISGLRCCNC 694
           ************************988.......................3445555666779**************** PP
   S: 160  dnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfs 238
           ++vs+++e+ + lsl++++ +     +l ++Lesft+ e+l+  +++ c++c++k+  ek++ l+klP v ++hLkRf 
   Q: 695  NSVSETFEKSVGLSLEIEDAD-----TLGSALESFTRVEKLD--EQLTCDTCNEKVSKEKQMLLDKLPLVATFHLKRF- 765
           *********************.....9**************8..58********************************. PP
   S: 239  fseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVte 316
            + ++ + eki+k+v++ple+dl+p++ +++e++ +++kY L+a v H G s+  GHY +yv++  + W +fdDskVt 
   Q: 766  -KTNGFFMEKIFKHVKIPLEIDLQPYMRNSQENE-VSTKYHLYALVEHLGySVAYGHYSSYVRSAPKIWHHFDDSKVTR 842
           .6677999*******************9977665.7****************************9999*********** PP
   S: 317  vkeeevleetgstaYvlfYkr 337
           ++e++vl+   ++ Y+lfY r
   Q: 843  IDEDRVLS---QDSYILFYAR 860
           ********...********87 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASSADNNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV 60
HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD GGKIEAKYTS RAADLYRQIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCTT CTGCTGACAA CAATCTTACC GACAAAAACA TTGTTTTCAG AAAACTCAAA 60
TCAAAATCTG AGAACAAGGT ATCAATTTTT TTCTGAATTC TTTACTCTCT TATACAAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc

Interpro

IPR001164--ArfGAP
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50115--ARFGAP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF01412--ArfGap
PF00443--UCH

PRINTS

PR00405--REVINTRACTNG

SMART

SM00105--ArfGap

Gene Ontology

GO:0005096--F:GTPase activator activity
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_329738

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006916	Arabidopsis thaliana	85.55	0.00e+00	997.00
IUUC-Bol-015783	Brassica oleracea	61.66	0.00e+00	640.00
IUUC-Bra-017262	Brassica rapa	67.06	0.00e+00	1222.00
IUUC-Gma-044214	Glycine max	54.62	2.00e-111	396.00
IUUC-Mtr-057925	Medicago truncatula	51.20	1.00e-103	369.00
IUUC-Pop-098814	Populus trichocarpa	48.89	2.00e-105	376.00
IUUC-Sly-111383	Solanum lycopersicum	53.63	5.00e-110	391.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence