iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095860

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545196

Gene Name

PHYPADRAFT_149939

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S307_2V6	PP1S307_2V6.2	PP1S307_2V6.2
PP1S307_2V6	PP1S307_2V6.1	PP1S307_2V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-31	108.2	256	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           e+p++f+Cp+s+elM+dPv+l+sG+ty+r +I+ wl++g++ cP+t+q+l+ ++l+Pn+t+++li +wce++++
   Q: 256  EIPADFRCPLSGELMSDPVILASGQTYERIYIQHWLNEGHSRCPKTHQKLSRRNLIPNYTVKALIANWCETHGV 329
           69*********************************************************************986 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MESSASRAPL LRLRIHRNNS HGNLVVNQHH SALADVIDKA VVVGERAAFQ RSNCVTLVER 60
LRRLRPLVDE VLDSKTPVVG FRFDNVEDAV VKAKELLERC GPDGSRVYMN LRTQRLLSRF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTGCAATC CGATCACTCG GGATCCCCTG CCTCTCTTGT TCGTTCGCTC GCTCGCTTGC 60
TGAAACCCAG AGAAGTGGTT AGTCAGACCA ACAGACTGAT ACTCGGGACA AGAAAAGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ppp:PHYPADRAFT_149939

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006261	Arabidopsis lyrata	69.93	9.00e-105	374.00
IUUC-Ath-006925	Arabidopsis thaliana	69.93	7.00e-105	374.00
IUUC-Fox-037811	Fusarium oxysporum	34.04	1.00e-19	90.90
IUUC-Kpa-049403	Komagataella pastoris	31.13	8.00e-22	97.80
IUUC-Mtr-057910	Medicago truncatula	65.67	8.00e-101	360.00
IUUC-Sly-111082	Solanum lycopersicum	42.75	1.00e-144	506.00
IUUC-Stu-112751	Solanum tuberosum	42.74	2.00e-146	512.00
IUUC-Tca-121129	Theobroma cacao	45.19	2.00e-154	538.00
IUUC-Tvi-122426	Trichoderma virens	34.57	4.00e-20	92.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence