iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095646

Ensembl Protein ID

PP1S76_167V6.2

UniProt Accession

A9TBW6; A9TBW6_PHYPA

Genbank Protein ID

EDQ59115.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545089

Gene Name

PHYPADRAFT_169211

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S76_167V6	PP1S76_167V6.2	PP1S76_167V6.2
PP1S76_167V6	PP1S76_167V6.1	PP1S76_167V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.30e-10	41.2	1836	1881

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C  Cg  ++ + s++ C+ C+  +H  Cl ++  e +p+ + w+Cp+C 
   Q: 1836 CRACGVDEDYD-SILLCDGCDAEYHIYCLVPP-LERVPKGN-WFCPSCV 1881
           65666555544.8*******************.*******6.******6 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDASLPRGCS AHKVSLQVES SGGTEVGNSF SNQGILGVLE FQSVGATRVE PVAYGKVPPA 60
DGNSKMALHV SKGATNEEFK LASSSMIGNH VAATVQNPEQ RHDETLKKGR GLSSIKSSTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCCT CACTGCCTAG GGGGTGTTCA GCTCATAAAG TCTCTCTTCA AGTGGAGAGC 60
TCTGGTGGTA CAGAAGTTGG TAATAGCTTT TCGAATCAGG GGATTTTGGG CGTCTTAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR018501--DDT_dom
IPR003888--FYrich_N
IPR001739--Methyl_CpG_DNA-bd
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50014--BROMODOMAIN_2
PS51542--FYRN
PS50982--MBD
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF02791--DDT
PF01429--MBD
PF00628--PHD
PF15612--WHIM1

SMART

SM00249--PHD

Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010216--P:maintenance of DNA methylation
GO:0016567--P:protein ubiquitination
GO:0090308--P:regulation of methylation-dependent chromatin silencing

KEGG

ppp:PHYPADRAFT_169211

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004867	Anolis carolinensis	40.74	2.00e-16	81.60
IUUC-Bci-013992	Botrytis cinerea	39.66	7.00e-11	63.20
IUUC-Cin-025321	Ciona intestinalis	44.62	1.00e-12	68.90
IUUC-Csv-026185	Ciona savignyi	38.46	3.00e-06	47.80
IUUC-Sja-107970	Schizosaccharomyces japonicus	44.26	6.00e-13	70.10
IUUC-Spo-108283	Schizosaccharomyces pombe	46.43	8.00e-13	69.30
IUUC-Stu-112523	Solanum tuberosum	57.78	3.00e-12	64.70
IUUC-Sbi-114812	Sorghum bicolor	27.01	2.00e-15	77.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence